KEGG   Fusobacterium varium: FV113G1_12180
Entry
FV113G1_12180     CDS       T05280                                 
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
  KO
K06958  RNase adapter protein RapZ
Organism
fva  Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:fva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fva03019]
    FV113G1_12180
Messenger RNA biogenesis [BR:fva03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FV113G1_12180
SSDB
Motif
Pfam: PapZ_C RapZ-like_N ABC_tran nSTAND3 AAA_18 AAA_22 AAA_28 AAA_33 AAA_30 RsgA_GTPase T2SSE cobW
Other DBs
NCBI-ProteinID: BBA50869
LinkDB
Position
1413044..1413898
AA seq 284 aa
MEKNKIVIVSGLSGAGKTTALNTMEDMGYYVVDNLPCEVGNFFINTSIEKLGLGIDIRSF
KKVDELFLLLSEMKKADIDYSLIFIEASEEIILNRYNLTRRKHPLEADTLLESIQREREI
MFPIREAATGIIDTSYIKPKELSERVKEILMVDGETKDINIHVQSFGFKYGIPIDLDLLF
DVRFLPNPYYVEELKEKTGEDEAVSSYVMEYNVSQEFAQRLLNLMDFLIPNYIKEGKKHL
TIGIGCSGGKHRSVTLASLLYKELSKKDKLNVYISHREKERGNW
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaaaaaaataagatagtaatagtaagtggattaagtggagctggaaaaactactgca
ttgaatacaatggaagatatgggatattatgttgtagataatcttccatgcgaagtagga
aacttttttattaacacttctattgaaaaattaggattagggatagatatacgttcattt
aaaaaagtagatgaactttttctgcttttaagcgaaatgaaaaaagctgacatagactat
tctcttatttttattgaagcttctgaagaaatcatacttaatagatataatttgactaga
agaaaacatccattagaagcagatactcttttagaaagtatacaaagagaaagagagata
atgtttcctataagagaggctgcaacagggataatagatacaagttatataaaacctaaa
gaattatcagaaagagtcaaagaaatattgatggtagatggagaaacaaaagatataaat
attcatgtacagtcatttggttttaaatatggtattccaattgatcttgatcttcttttt
gatgtaagatttcttccaaacccatactatgtagaagaattaaaagaaaaaacgggagaa
gatgaagcagtatcttcttatgtaatggaatataatgtatctcaagagtttgctcagcga
cttttaaatttgatggattttcttattcctaattatataaaagagggaaaaaaacattta
actataggtataggatgtagtggaggaaaacatcgttcagtaactttagcttctttgtta
tacaaagaactttctaaaaaagataaactgaatgtatatatcagtcatagagagaaagag
agaggaaattggtag

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