Fusobacterium varium: FV113G1_13020
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Entry
FV113G1_13020 CDS
T05280
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fva
Fusobacterium varium
Pathway
fva03030
DNA replication
fva03430
Mismatch repair
fva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FV113G1_13020
03430 Mismatch repair
FV113G1_13020
03440 Homologous recombination
FV113G1_13020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fva03032
]
FV113G1_13020
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_13020
Enzymes [BR:
fva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FV113G1_13020
DNA replication proteins [BR:
fva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FV113G1_13020
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FV113G1_13020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBA50953
LinkDB
All DBs
Position
complement(1494628..1495197)
Genome browser
AA seq
189 aa
AA seq
DB search
MKILYLDTETTGTTANSAVIQFAGIIEIDGEVKKEFNIRCKPHKNADISEKALEVTGMTL
DIINSYQEPKKAFEEIESIFEKYCDRFDRNDKFILVGQNIKFDFQKLYEFYVRLGNKYLG
SWINFKLMFDTLAVIQALQFVDRLPILENNKLITWCNHFDIKLENAHDALADIRATRELT
KILIKMLER
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactatatttagacacagaaacaactggaactactgccaattcggcagtaatc
cagttcgcaggaattatagaaattgatggagaagtaaaaaaagaatttaatattagatgt
aaaccacataaaaacgctgatataagcgaaaaagctttagaagtaacaggaatgacattg
gatattataaatagctatcaagagcctaaaaaagcatttgaggaaatcgaaagcatattt
gaaaaatactgtgatagatttgatagaaatgacaaatttatccttgtgggtcaaaatata
aaatttgacttccaaaaactttatgagttctatgtaagacttggtaataaatatctagga
agttggattaacttcaaattgatgtttgacactctagcagtgatacaggccctacaattt
gttgatagattacctatattagaaaataataagctgataacatggtgtaatcattttgat
ataaaactggagaatgctcatgatgcattagcagatataagagctactagggaacttaca
aaaatcttaataaagatgttggagagataa
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