Fusobacterium varium: FV113G1_19230
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Entry
FV113G1_19230 CDS
T05280
Name
(GenBank) putative DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fva03032
]
FV113G1_19230
03036 Chromosome and associated proteins [BR:
fva03036
]
FV113G1_19230
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_19230
DNA replication proteins [BR:
fva03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FV113G1_19230
Chromosome and associated proteins [BR:
fva03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FV113G1_19230
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FV113G1_19230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
L31
HU-CCDC81_euk_2
LtuB
DASH_Duo1
Spectrin_5
Motif
Other DBs
NCBI-ProteinID:
BBA51573
LinkDB
All DBs
Position
complement(2180999..2181271)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKRELAKVYSEVSKGKISVRKALKEIDTFLETIQEALQKSHSLIFINIGIFEVKERKAR
VIANPVNKEPMKIYPRKTVKFRVSKNIYDK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagagaattagcaaaagtatacagtgaagtgagtaaagggaaaatatcagta
agaaaggcgctgaaagaaatagatacatttcttgaaacaatacaggaggctttgcagaaa
agccattcattaatatttataaatataggaatatttgaagtgaaggaaagaaaagcaaga
gtaatagccaatcctgtgaataaagagccaatgaagatttatccaagaaaaacagtgaaa
ttcagagtatcaaaaaatatttatgataaataa
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