Fusobacterium varium: FV113G1_19520
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Entry
FV113G1_19520 CDS
T05280
Name
(GenBank) putative ATP-dependent nuclease
Organism
fva
Fusobacterium varium
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
CC2D1A-B_DM14
Motif
Other DBs
NCBI-ProteinID:
BBA51602
LinkDB
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Position
complement(2207368..2210439)
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AA seq
1023 aa
AA seq
DB search
MKNRLVLKASAGTGKTYRLSLEYVGALCRGIDFKDILVMTFTKKATAEIKERILKFLKEL
AENAKNGESIKENLKKIYPDMEFDYPKISAIYQDLIQNRDKLKVYTIDAFTNLIFKKAIA
PYLKIYSYEIIDDDENRKMLIKTFQKIFDNKDDFRAFKGFLEDNSEKDMENYLTLIKNLL
NERWKVIVLGEKLKEKREALTSDNNYKHMDRIVEILERISKIKDKSLEELFKTSLKKYLL
CKDENEKEAFILEKNGDILEKEIWNGVKVKSKKGDIDSELEDMKYIYGELKDNLAKTMYN
NSIIPYEEKLLYILNRIYEVYDDIKFKEKRFTHSDISSYTFKYIRDKELNFINENGVTDE
FFEILDGKIDTIFIDEFQDTSILQWKILKDIIDQTNNVICVGDEKQSIYGWRGGEKKLFE
NLEKIIDGKEEKLFTCFRSEKNIVSFTNMIFSNISKMSENEEFEGESWNFYEVNSKSDDI
AGHIEILRKKTSEEVTVIDQIIKKIKEDFNKNYKGIGILGRTNKELDMIAEKLSEADIPY
VIDSNSNIVDYRGINGLFSLINYLVKDDYLSLLDFFRSDLINIGVKTLKYMIKNRKDIEK
YLNMEDTETALNGTELTVLETVRDIKKEYMENNGETSFLTYNILKKVGIGGKFNSKSDIS
NIYSFYKIIKNYKYFEEFIVEFEDKKNSDKFKKMVLEDDNSVNIMTIHKSKGLEFDTLFY
YYNPSSRGSSRGNVRFFLKMDKDYNEPESFLITHDKFKKIIKSLGKEYDYLNDIEIKEKH
EEINNLYVALTRPKNNLYIAVENDKESIFSEALFLSENTIQDSDIVFSKNDKGTAEGKKR
EFTVDLSTPEAEYPEAEESMEKEREKIYSHALGNEIKRVRGTTVHFFLENIMYGTSEEIA
LAKELTFSKFASVIGEKTIKELLADEVIEYILNKNKKIFSDEWDFIFPEYEVFTDEKTYR
IDRLMVKMPVNDSKGTIYIVDYKTGDTDEDQMENYKYLIEKLLEDRKMLDKFEIITEFIE
FKL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacagactggttttaaaagcaagtgctggaacaggaaaaacttatcgtctctct
ttggagtatgtaggggcattgtgcagaggaatagattttaaagacatacttgtaatgact
tttactaaaaaagccacagctgaaataaaagaaagaatacttaaatttctaaaggaactg
gcagagaatgcgaaaaatggagaaagtataaaagaaaatttaaagaaaatatacccagat
atggaatttgactatccaaaaatatcagctatatatcaggatttaattcaaaatagagat
aaactaaaagtatatacaattgatgcttttacgaatttaatatttaaaaaggctatagca
ccatatttgaaaatttattcatatgaaataattgatgatgatgaaaatagaaagatgctg
ataaaaacatttcaaaagatatttgataataaagatgatttcagagcttttaaaggtttt
ctggaggataattcagagaaggatatggaaaattaccttacacttataaaaaatctttta
aatgaaagatggaaggttatcgtcttaggagaaaaactaaaagagaaaagagaagcactg
acatcagacaacaattataaacacatggatagaatagtagaaatactggaaagaatatct
aaaataaaagataagtctttagaagaattatttaaaacttcattgaaaaaatatctgtta
tgcaaagatgaaaatgaaaaagaagcttttattcttgaaaaaaatggagatattcttgaa
aaagaaatatggaatggggtaaaagtaaagtctaaaaaaggggatatagattctgaacta
gaggatatgaaatatatctatggagaattgaaggataaccttgctaaaactatgtataat
aatagtattattccctatgaagaaaagctgctttacatattaaatagaatatatgaagtt
tatgatgatataaaatttaaagaaaaaagatttacacattcagatatcagcagttatact
ttcaaatatataagagataaggaattgaactttataaatgaaaatggagtaacagatgaa
ttctttgagattttagatgggaaaattgatactatatttatagacgaatttcaagataca
agtatacttcaatggaaaatattgaaagatataattgatcaaacaaataatgtaatctgt
gttggagatgaaaaacaaagtatttatggatggcgtgggggagaaaaaaagctatttgaa
aatcttgaaaagataatagatgggaaagaagagaaactttttacttgttttaggagtgaa
aaaaatatagtaagttttacaaatatgatattttcaaatatatctaaaatgtcagaaaat
gaagaatttgaaggagagtcatggaatttttatgaagtaaactctaagtcagatgatata
gctgggcatatagagatactgagaaaaaaaacatctgaagaagtgactgtgatagatcag
ataataaaaaagataaaagaggattttaacaagaactataaaggaataggaatattggga
agaactaataaggaactggatatgatagctgagaaattatcagaagcagacatcccttat
gtcatagattcaaattctaatatagtggactataggggaataaatggacttttttctttg
ataaactatcttgtaaaagatgattatctctcacttttggatttttttagatcagatttg
ataaatataggggtaaaaactctaaaatatatgataaaaaatagaaaagatatagaaaaa
tatcttaatatggaagatacagaaacagcattaaatggaactgaacttacagtattggaa
acagtgagagatataaaaaaagaatatatggaaaataatggggaaacaagttttctaact
tacaatatattgaaaaaagtaggaataggtggaaaatttaatagtaaaagtgatatttca
aatatttattctttttataaaataataaaaaattataaatattttgaggaatttattgtt
gagtttgaagataaaaaaaatagtgataaatttaaaaaaatggtattagaagatgataac
agtgtaaatattatgactattcataaatcgaaggggctggagtttgatactttattttac
tattataatccttcatcaagaggcagttcacgaggaaatgtaagattctttctaaagatg
gataaagattacaatgaacctgaaagttttttaataactcatgacaagtttaaaaaaatt
ataaaatctttaggaaaagaatatgattatctgaatgatatagaaatcaaagagaagcat
gaagagataaataatctgtatgtagctcttactagacctaaaaataatttatatatagca
gttgaaaatgataaagaaagtattttttctgaagctttatttcttagtgaaaatactatt
caggacagtgatattgtgtttagcaaaaatgacaagggaacagctgaaggaaaaaagaga
gaatttacagttgatttatcaactccagaagctgaataccctgaagcagaagaaagcatg
gaaaaagaaagagaaaaaatttactcccatgctcttggaaatgaaataaaaagagtaaga
ggaacaactgtacatttctttttggagaatattatgtatggaaccagtgaagaaatagct
ttagcaaaagaattaactttttcaaaatttgcttcagtaataggagaaaaaactataaaa
gaactgctggcagatgaagttatagaatatattctaaataaaaataaaaaaatattttct
gatgaatgggattttattttccctgaatatgaagtattcacagatgagaaaacataccgt
atagataggttaatggtaaaaatgccagtaaatgactccaaagggacaatttatatagtg
gattataaaactggagatactgatgaagatcagatggagaattataaatatttaatagaa
aaacttttagaagatagaaaaatgctggataaatttgaaataatcacagaatttatagaa
tttaaattatga
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