Fusobacterium varium: FV113G1_19600
Help
Entry
FV113G1_19600 CDS
T05280
Name
(GenBank) putative transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fva03000
]
FV113G1_19600
Transcription factors [BR:
fva03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FV113G1_19600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_3
HTH_23
HTH_24
HTH_Crp_2
Xre-like-HTH
MarR_2
HTH_3
Sigma70_r4_2
HTH_38
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
BBA51610
LinkDB
All DBs
Position
2218852..2219811
Genome browser
AA seq
319 aa
AA seq
DB search
MKDIAAHLGISVATVSRTINGSENINSETKKRILAFVEKKGYTPNVIARNLSKMENNTIA
LLVPNISNPFFASLINNICANFAKSDYQIALYNTSEDIELEKKAIKNIIGQRIAGVIAIL
INGKYEENPLLPLINYNIPVFLLDRDIKDYTLPGIFLDNYIGAYKVVTELLNRGHRDIAI
ITGDLSSLNAEERLKGYINAHLDMNIPYSKTNIHEGDFLFESGYKAGKKILNTSATAVFA
SNNLMLLGFLKAMKAVDKEMELSCFEEIEYLEVLGINIISCKIPLDIIGEKTYSLFFTDK
NKRKKTYIEPILIKNRKEF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacattgcagctcatcttgggatttcagtagccactgtttccagaactattaat
ggaagtgaaaatatcaattctgaaactaaaaaaagaattttagcatttgtagagaaaaaa
ggttatactccgaatgttattgcacgaaacctctctaaaatggaaaataataccattgct
cttttagttcctaatatcagcaatccattttttgcctcacttatcaataacatatgtgca
aattttgctaaaagtgattaccaaatagctctttacaatacatctgaagatattgaatta
gaaaaaaaagccataaaaaatataattggacaaagaatagctggtgttattgctattctt
atcaatggaaaatatgaagaaaatccccttctcccacttattaattataatattcccgtt
tttcttttagacagagatattaaagattatactcttcctggaatatttcttgataattac
ataggtgcctataaagtagttacagaattattgaataggggacatagagatatagctatt
attactggagatctttcctctctcaatgcagaagaaagattaaaaggatatataaatgcc
caccttgatatgaatattccatattcaaaaactaatattcatgaaggagattttttattt
gaaagtggatataaagctggaaaaaaaattttgaatacttcagctacagctgtatttgct
tctaataaccttatgcttttaggatttttgaaagctatgaaagctgttgataaagaaatg
gaattatcatgttttgaggaaattgaatatctagaggtacttggaataaacattatctct
tgtaaaataccacttgatataataggagaaaaaacatactctcttttttttacagataaa
aataaaagaaaaaaaacatatatagaacctattttgataaaaaatagaaaggagttttaa
DBGET
integrated database retrieval system
