Fusobacterium varium: FV113G1_20620 Help Entry FV113G1_20620     CDS       T05280                                  Name (GenBank) putative autotransporter Organism fva  Fusobacterium varium SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WZC_N Motif Other DBs NCBI-ProteinID:  BBA51712 LinkDB All DBs Position complement(2310074..2320246) Genome browser AA seq 3390 aa AA seqDB search MRKNEIEKSLKRFLKRKVSFSFSILIAFLITGGISLGAGITAEEIQETKGDILTRIELER EEIKRKIAENEKLIKEYNSDFVELVRKGDFYSKPLISSTQVFFTYQYLDNGKTKDRTEKE FKETIDAVNEYYGTRAGKSMLKSSGNIGKDKIMSGNGVAVDTSVFREEIDLGANIQLLEP EMPEINPSVSVNVTTPNVVLGALPGAVNPVAITIPSISITQPGTPSAPSGVTVTVVTPSA VDKIEITAPVIPTPTEPAEKNIVVNLPAAPEGYEPTMIIPPAAPSTPTIVAPVEFTPPAL NFVGTGFGQSYGIGSVQNGAKRGSIDANIVIENYENYSTPGNTEANPIKITAGGNVTTWS NGNIHASTTVEYSFSEILAPGSTGKTNAFINELRDHNAIIGGNYQMNYGTSDSVYTKMFL SHNPAGRHTSDGFPSMGGGLSSGWLGQSGGAKTAEFTGTLVLNGSSKINPVSGTTYEILV GVEHQLWDSQDNRVGYSIFNNKGKITLNSGYNVIGIMIDTEALNETGRTKYNNNQTKNTG VIIINNENSIGIDFGAYTAQTYIPVDVEIGNIEVNGKNNYGYRMKNIFTSNNVYYDDVTV SGGAGKITVGGQKNVGLAIGKSLSSAPSPYTEAGNLNHGVLSGANPISNFFGINVEIVGN EVIGFLRLLDYSANNTNDFIFNNQVMGNFNIGTGATNSTLIRTDKYGIQIQADITTTGTS GSGNTVAHSNGQTQHIYNSGNITVGSGLIQTTGLSATGTALSSKINIRNTGTIILGGKES TGMYVDKWTQGENTGTIKMTGSEKNAAISNEGKFNLSGTLEVNGEKSSGLYNTGTGATTI NNNTVIKAENGATGIYGNGGTIALTSGKSLKITVDDSSNPVTKGLAVYAGNGSIINIQGA DINVKNGSAGVASFGAGSSINLNNAKLEYRGDGYAAYSDGVGKIDLTGAEIILGGNATGI EMDLNIPEASRPIKLSNTTITMMSNDAIVANLKNAAGLQSSNLQGTIITALGGNININPG TDMYGTYDKYKVAAVDGGDLTIDNDMDKFSTVNTSDGYFYSRRFLAQRLKLDVAAGVKVN ASTDSTYANDYFKGQVVGLEMSSSKAAVSVADTQINLKYNSLDGGAKISANRTDSGGSGA IGLYINYGEINAEAGTTIEVETGSGPVNDKGVGIYAVNGSKVKAQGDIKVAGNKAIGILG MTNREQQPLGTPIIDEFGGKAGENTISIENSGNIELAGEGNIGIYAFNNKPSGTKTDATA KNSGNINIGNSTSSEMAVGIYGSNATLENTGNISVGTGAIGIYAAFDSEVTNVGALKLGT NAIGVLANEKTVLNTTTLTLNQNGSGTTGQTAIFYKGEGTGAETQTLNFGINTQNLEKAT AVYAENLNFVSNAQLDIGKDGVGIYLKKGSLNNTATNAGIINLLSGKTGAIGMYTSAGKI INSNTININDSTHIGMFASGTGNTVSNGGTINLGADSSTGIYVKDGAKAELNALGSIIFT GKESVGVFAENAEVEIKDNILFSQSNENKNIFAYGKNGAKVTLDAGKTLNVNGVGTPVTT GHKTVGIYLENSSGKSSYIGNGKIQVSNQAIGLYSKGENDLIVNVEATGAKTTGIFVDRA SNIGGTVTAENDAIGVYGDGGKLNIGVGAATDLTLKTTAGIGTGMYLTSGAYAVGGDINV ENTTSNKNIGVYYSKGTGSSPVTNSSKINLKDGNTIGIYAADGINLSNNSDITTLAGKAG NIGAFVGGNSRYTSNADITLNGAGGIGVYSENGQGINSAAGKIFLNDLGTTSVGMAAENT ASVENLGTITDAGQNLGMYISGTASSLGKNSGTITTDKGTGVYVEGAGNSFDGSAGKIEV VTSGIGIYLENTGSNKIKSGILDIASGAVGVYGDNAKIDFTVNSSASTGAIGVTAKNNSV ISGNITTGTGSVGTYILDGTVSLNGAVITTGVNTLDTSVGILLDKGITSTYTINNVSVNA RNGVGIYLGNDTGTFTGVDLVLNGTVKTEGGVGVYVTEYSTLTTGNATLNIDGGAGIYVD KGTANLGITGNLTFNFLSGGGIGIFNNGGNLTLGNNINVTGSGSLASTSNGSLSSTGNLN VGDGAVGLLGEYNSGTTTPQSISNSGNITASSGGIGLAAMKGSSLPGAGITIANSGIITA SGKSSSNASIGIYTDIADVANTGQINVGTDGIGIYSSNNGTALSIQNDNMIMTGTDGIGV YIKGTVTGIISNNITSVAGSSNNTGVVLENVTGVPLNIGTISLGADSIGVLAKGTTGTVN GTIGVGNGETSIGLVADSGSNITIGTSANISAGDKGIGVYVNGASSSVIINDISKISVGT DGVFVYSNGGNLTFSGNLVADNKIGIVAEGGSVNTLGSSITAKNGGIGAYVKSSAPSFGT TAITVQAGTSEKHSIGIYYDSVTSVGTIPTINQTGNNTIGLILNKSSGTLAGTTIGATGR NQVGIMVKGTVSNNVAVTGNIDVSGDKNIGLYNEGGALNIGGTVLVGTSSSGVQSSIGVY LDGGTYTGTGTVSVGANSIGIYGVNVGNISQTGAPISVGAGAVGIYGAGTGTETMTVTAP NITVGTDKAVGVYGKDINMLVSGNMSVGAGKSVGIVSSGNGNISYTGDITVDNKGTSEAS IGIYKALGTGVITASAGNWNVGDGGYGIYVQQVIKEEGKADIITSNTATINNDADMVLGE AAVGIYASGNNDITNTGNITVGATTVPGGNHANVAEHKNSVGIYLSSGSKAVNTAGTAIT VNHDHSLGVFGTGAGTKFTNNGIMNIDNGGIGVLVRDGAIAVNNGTINLGGTLAACGAST VGMAAYAGGTIINNAVINVTEGVGMLLSVGSELVNDGTINVVNGTGIEGSGKVVNRGNIY VTGTGKAEDTSGTSSTANIGSVVVDSKGNITINDKYVAIGGTLSTAGSIIVNGAYVDVTT GTPLFNAHSVSGEVKLLSNFASTGNGRTYLIEDFVNTAAGTITGNKLTPVTSPLFIAKVT SDGHLVIVKRPYADLTIGEQFDALDKGLDNILENSNGMGRDADILKGLNEYLDGLDTGSF EKEATRTLAELRGDIYATIQGRMQDINRAFDNSFYELESSYNLTKDSSKYSIIYTDGNYK DSTLGIDDYDYKVMGVLYMKEKEGAEYGSKYGYTLGFAGSKFKFDDGGSKEDVYSLRAGI HNVKNFSDEYKISLLSRVELGYNRHIAKRKIELNKTYENKADYNTYSVSFDNKLSKTIYT DLSSQLDIYTDLDLEYGKIGKFKERAGSNGGLEVQIKDNDYFSAQLGAGIKAHQKIYAGN DISVKLTGDVKYAYELGENYDGNKARLKNGGEGYYSLITPEKQEGKIIGKVGLTIEKANH MGVTFEVEAADEGHRKDSSVKYGVRFNYKF NT seq 10173 nt NT seq  +upstreamnt  +downstreamnt atgagaaaaaatgagatagaaaaatctctaaaaagatttttaaagagaaaagtcagtttc tctttttcaattttgatagcttttctgataacaggaggaatatcattaggagcagggata acagcagaggaaatacaggaaacaaaaggagatattttaactagaattgaattagaaaga gaagaaataaaaaggaaaatagctgaaaatgaaaaattgataaaagaatataattcagat tttgtagagcttgtaagaaagggagatttttattctaaacctctaatatcaagtacacag gtattttttacttatcagtatctggataatggaaaaacaaaagacagaacagaaaaagaa tttaaagaaacaatagatgcagtaaatgaatattatggaacaagagctggaaaatctatg ctgaaatcttctgggaatattggaaaagacaaaataatgtcagggaatggggtagctgta gatacctcagtatttagagaagaaatagatttaggagccaatattcagcttttagaacct gaaatgcctgaaattaatccaagtgtatctgtgaatgtaactacaccaaatgttgtatta ggagctctgccaggagctgtgaatccagttgcaataacaataccaagtatatctataact caaccaggaacgccatcagcaccaagtggagtgacggtaactgtagtaacaccatcagca gtggataaaatagaaataactgcaccagttattccaactccaactgaaccagcagaaaaa aatatagttgtaaatctcccagcagcacctgagggatatgaaccaactatgataattcca ccagcagcaccatctacaccaacaatagtagcaccagtggaatttactccaccagcttta aactttgtaggaacgggatttgggcagtcatatggaatagggtcagtgcaaaatggggct aagagaggaagtatagatgccaacatagtaatagaaaactatgaaaattattcaactcca ggaaatacagaagccaatccaataaaaatcacagctggaggtaatgtcactacatggagc aacggaaatatacatgcttcaactacagtagagtattcctttagtgagatattggctcca ggaagtacaggaaaaacaaatgcttttataaatgaactaagagatcataatgctattatt ggtggaaattatcagatgaattatggaacttcagatagtgtatatacaaagatgtttcta agtcataatccagctggacgacacacatctgatggattcccatctatgggtggaggattg tcatcaggatggctgggacaaagtggaggagcaaagacagcagaattcactggaacacta gtattgaatggttcatctaaaataaatccagtatcaggaacaacatatgaaatacttgta ggagtagagcatcaattatgggatagtcaggataatagagttggttattcaatatttaat aataaaggaaaaataacattgaattctggttataatgttattggaataatgatagataca gaagctcttaatgaaacaggaagaactaagtataataataaccagactaaaaatacaggg gttattataataaataatgaaaatagtatagggatagattttggtgcttatacagctcaa acttatattccagttgatgttgaaattggaaatattgaggtaaatggtaaaaataactat ggttatagaatgaagaatatatttacttccaataatgtatattatgatgatgtaactgta tcaggaggagcaggaaaaataactgttggtggacagaagaatgtaggacttgctatagga aaatctctttcttcagctccaagcccttatacagaagctggaaatttgaatcatggtgtg ttaagtggagcaaatccaatatctaacttttttggaattaatgtagagatagtaggaaat gaagtaataggatttttaagactgcttgattattctgctaataatactaatgattttata tttaataatcaggtaatgggaaactttaatataggaactggggcgactaacagcactctt ataagaactgataaatatggaattcagatacaggctgatatcacaactactggtaccagt ggcagtggaaatacagttgctcattctaatggacagacacagcatatatacaacagcgga aatataactgttgggagtggtcttatacagactacaggattatctgctactgggacagca ttatcgtctaaaataaatattagaaatactggaactattattctaggtggcaaagaaagt acaggaatgtatgtagataagtggactcagggagaaaatacaggaacaattaaaatgaca gggtctgaaaaaaatgctgctatttctaatgaaggaaaatttaatctttcaggaacttta gaagtaaatggagaaaaatcatcaggactgtataatacaggaactggagcaactacaata aataataatactgtcatcaaagctgaaaatggtgcaacaggtatttatggaaatggtgga acaatagcacttacttctggaaaaagtttgaaaataacagttgatgattcttctaaccct gtaacaaaaggattggcagtttatgctggaaatggttctattataaatatacagggagca gacataaatgtaaaaaatggatcagcaggagttgcttcttttggtgcaggaagcagcatc aatttaaataatgcaaaattagaatatcgtggtgacggttatgcagcatattctgatggt gttggaaaaattgatttgacaggtgctgaaataatacttggtggaaatgccacaggaatt gaaatggatttgaatattccagaagcatctagacctataaaattgagtaatacaactata actatgatgtcaaatgatgctatagttgctaatttgaaaaatgcagcaggactgcagagc tcaaatcttcagggaactataataactgctttaggtggaaatataaatattaacccagga actgatatgtatggaacatatgacaaatataaagtagcagcagtagatggaggagatctt actattgataatgatatggataaattttctactgtgaatacttcagatggatatttttat tcaagaagatttttggctcaaagattgaaattggatgtagcagctggagtaaaagtaaat gcttcaacagacagtacatatgccaatgactattttaaagggcaggttgttggactcgaa atgagttcaagtaaagcagcagtttctgtagctgacactcaaattaatttaaaatacaac tctcttgatggcggagctaaaatatctgcaaatagaactgattctggaggttcaggagct attggattatacataaattatggtgaaataaatgcagaggctggaacaactatagaagta gaaactggaagtggacctgtaaatgataaaggtgtaggaatatatgctgtaaatggaagt aaagtaaaagctcaaggggatataaaagtagctggaaataaagctattggtatattggga atgactaatagagagcaacagccattgggaacaccaataatagatgaatttggagggaaa gcaggagaaaatactatatctatcgaaaacagcggaaatatagaactggcaggagaaggg aatatagggatatatgctttcaataataaaccatctgggacaaaaactgatgcaacagct aaaaatagtggaaatataaatataggaaattctacaagctcagaaatggcagtgggtata tatggaagtaatgcaactttagaaaatactggaaatatctcagttggtacaggagctata ggtatttatgctgcttttgattcagaagtgacaaatgtgggagcacttaaattaggtaca aatgcaataggagtattagctaatgaaaagacagtgcttaatacaacaactttaacttta aatcaaaatggaagcggaacaacaggacaaacagctatattctacaaaggtgaaggaact ggagcagaaacacaaactttaaattttgggataaatactcagaatcttgaaaaagcaaca gctgtttatgcagaaaatcttaattttgtttcaaatgcccaattggatataggaaaagat ggagtaggaatatatctgaaaaaaggaagtctaaataatactgctactaatgctggaata ataaatctattatctggaaaaacaggagcaataggaatgtatacttcagcaggaaaaatt attaacagtaatactataaatataaatgattctacacacattggaatgtttgcttcagga acaggaaatacagtttcaaatggaggaacaataaatttaggagcagatagttctactgga atatatgtaaaagatggggctaaggcagaattaaatgctttaggaagtattatttttact ggaaaagaaagtgtaggagtatttgcagagaatgcagaagttgaaataaaagacaatatt cttttttctcagtctaatgaaaataaaaatatctttgcttatggaaaaaatggagctaag gtaactttagatgctggaaaaactttgaatgtaaatggagttggaacaccagtgactaca ggacataaaacagttggaatatatcttgaaaactcatcaggcaaaagttcatacatagga aatgggaaaatacaggtaagcaatcaggctattggactttattcaaaaggagagaatgac cttattgtaaatgttgaggcaacaggagcaaaaacaactggaatatttgtagatagagct tcaaatataggaggaactgtaactgctgaaaatgacgctattggtgtgtatggtgatggt ggaaaattaaatataggagtaggagcagcaacagacttaactttaaaaacaactgcagga ataggaacaggaatgtatcttacaagtggggcatatgctgttggaggagacatcaatgtc gaaaataccacttcaaataaaaatattggtgtgtattacagcaaaggaacaggaagttct cctgtaactaacagttctaaaataaatctaaaagatggaaatacaataggaatatatgca gcagatggaataaatctttcaaataattcagatattactactcttgcaggaaaggctgga aatataggagcttttgttggaggaaattctagatatacttcaaatgctgatattacttta aatggagcgggaggaataggagtctattctgaaaatggtcagggaataaattcagctgca ggaaaaatatttcttaatgatttaggaactacttcagtgggaatggcagcagaaaatact gcttctgtagaaaatctaggaacaataacagatgctggacaaaatcttggaatgtatatt tcagggactgcttcaagtttagggaaaaacagcggaactataactacagataaaggaaca ggagtatatgtagagggggcaggaaatagctttgatgggtcagcaggaaaaatagaagta gtgacaagcggaataggtatttatttggaaaatacaggttctaataaaataaaatctgga attctggatatagcttcaggagctgtgggagtttacggtgataatgctaagattgatttt acagtaaattcttcagcgtctacaggagcaataggagttacagctaagaataattcagta atatcaggaaatattacaacaggaacaggatcagtaggaacgtatatcttagatggtaca gtttcattaaatggagcagtgataactactggagtgaatacattagacacatctgtaggg atacttttagataaaggaataacatcaacttatactataaacaatgtaagtgtaaatgcc agaaatggagtaggaatctatttaggaaatgatactggaacttttacaggggtggattta gttcttaatggaactgtaaaaactgaaggaggagtaggagtatatgtaactgagtattct actttgacaacaggaaatgcaactttgaatattgatggaggagcaggtatctatgtagat aaaggaactgcaaatcttggaataacaggaaacctgacatttaatttcctgtcaggtgga ggaataggaatatttaataatggaggaaatcttactcttggaaataatataaatgtcaca ggatcaggttcacttgcatcaacatctaatggaagtctgtcatcaacaggaaatcttaat gtaggagatggagcagtaggacttttaggagaatataacagtggaacaactacaccgcaa agtatatcaaattctggaaatataacagcatcatcaggtggaatagggcttgcagctatg aaaggaagttcacttccaggagcaggaataacaatagctaatagtggtataataactgcc tcaggaaaatcatcaagtaatgcctctattggaatatatacagatattgctgatgtagca aatacagggcaaatcaatgtaggaacagatggaattggtatctattcttctaataacgga acagctctatcaatacagaatgataatatgattatgacaggaacagatggaataggtgta tatattaaagggacagtaactggaataatatcaaataatatcacttcagttgctggatca tctaataatacaggagttgtattggaaaatgtcactggagtacctttaaatataggaaca atttctttgggagcagacagtataggagtattggctaaaggaacaactggaacagttaat ggaactattggagttggaaatggagaaacatcaataggacttgtagctgacagcggctca aatataacaattggaacttctgcaaatatttcagcaggagataagggaataggagtatat gtaaatggagcttcttcttctgttataataaacgatatttcaaaaatcagtgtaggaaca gatggagtatttgtatattcaaatggaggaaatctcacattctctggaaatcttgtagct gacaataaaattggaatagtagcagaaggaggaagtgtaaatactttaggttcttctatt acagcaaaaaatggaggaataggtgcttatgtaaaaagttcagctccatcatttggaact actgctataactgtacaagctggaacatcagagaaacattcaataggaatttattatgac agtgttacttcagttggaactattccaacaataaatcaaactggaaataatactattgga ttgatattaaataaatcttctggaacattggcaggaactaccattggagcaacaggaagg aatcaggtaggaataatggtaaaaggaactgtttccaataatgtagcagtaactggaaat attgatgtatcaggagataaaaatatcggattgtataatgaagggggagcattaaatata ggaggaactgtacttgttggaacttcttcatcaggagtacagtcttcaataggagtatat cttgatggaggaacatatacaggaacaggaactgtatcagtaggagccaacagcattggt atctatggagtgaatgtaggaaatatttcacagacaggagcacctatttcagttggagca ggagccgtaggtatctatggagcaggaactggtacagaaactatgactgtaacagcccca aatattacagttggaactgataaagctgtaggtgtttatggaaaagatataaatatgctg gtatcaggaaatatgtctgtaggagctggaaaaagtgttggaatagtaagttctggaaat ggaaatatttcatatactggagatataacagtagataataaaggaacatcagaagcatct attggaatatataaagctctgggaacaggagttataactgcttcagctggaaactggaat gtaggagatggaggttatggaatctatgttcaacaggtaataaaggaagaaggaaaagca gacatcattacttcaaatactgcaactataaataatgatgcagatatggtacttggagaa gccgctgttggaatttatgcctctgggaataatgacataacaaatactggaaatataaca gtgggagctacaactgtaccaggaggaaaccatgcaaatgtagcagaacacaaaaattca gttggaatctatctgtcttctggaagtaaagctgtaaatacagcaggaactgcaataact gtaaatcatgatcattcattaggagtatttggaacaggagcaggaactaaatttacaaat aatggaattatgaatatagataatggaggaattggtgttctggtaagagatggagcaatt gctgtaaataatggaactattaatttaggaggaacattagctgcttgtggagcttctact gtaggtatggcagcatatgctggcggaacaataatcaataatgctgttataaatgtaact gaaggtgttggaatgcttttaagtgtagggtctgaacttgtaaatgatggaactatcaat gtagttaatggaacaggaatagaaggcagtggaaaagtagtaaacagaggaaacatatat gttactggaacaggaaaagctgaagatacttcaggaacatcttctactgccaatatagga agtgttgttgtagattcaaaaggaaatatcacaataaatgataaatatgtggctattgga ggaacactttcaacagcaggttctataatagttaatggggcatatgtagatgtaacaact ggaactccactgttcaatgcacatagtgtaagcggagaagtaaaacttctttcaaatttt gcttcaacaggaaatggtagaacttatttaatagaagattttgtcaatacagcagcagga actataacaggaaataaacttactcctgtcacttctcctctatttatagctaaagtcaca agtgatgggcatttagttattgtaaaaagaccatatgctgaccttactataggagaacag tttgatgctcttgataaaggattggataatatattggaaaatagcaatggaatgggcaga gatgcagatatattgaaaggcttaaatgaatatctggatggtttggatacaggaagtttc gagaaagaagccactagaactcttgcagagctgagaggagatatttatgcaactatccag ggaagaatgcaggatatcaatagagcttttgataattcattttatgaattggaatcttca tacaatttaacaaaagacagcagcaaatatagtattatttatactgatggaaactataaa gattcaacacttggaatagatgattatgattataaagtaatgggagttctttatatgaaa gagaaagaaggtgctgaatatggaagcaaatatggttatacattaggatttgcaggatct aaatttaaatttgatgatggcggttcaaaagaagatgtatattcattgagagcagggata cataatgttaaaaactttagtgatgagtataaaatttcattgttatctagggtagaatta ggatataatagacatatagctaaaagaaaaattgaacttaacaaaacttatgagaataaa gctgactataacacttattcagtaagttttgacaataaacttagtaaaacaatatataca gatctttcaagccagcttgatatatatactgatttagatcttgaatatggaaaaatagga aagtttaaagaaagggctggaagtaatggaggtttggaagttcaaatcaaagataatgat tatttcagtgcacaattaggagctggaataaaagcgcatcaaaaaatatatgctggaaat gatatttcagtaaaattgactggagatgtaaaatatgcgtatgaacttggtgaaaactat gatggaaataaagccagacttaaaaatggaggggaaggatactacagcctgattactcca gagaaacaggaaggaaaaatcataggaaaagtaggtttgacaatagagaaagcaaaccat atgggagtgacatttgaagtggaagctgcagatgaaggtcacagaaaagattcatcagtt aaatatggagtaagatttaattataagttctaa

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