Fusobacterium varium: FV113G1_26320
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Entry
FV113G1_26320 CDS
T05280
Symbol
pdxS
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
fva
Fusobacterium varium
Pathway
fva00750
Vitamin B6 metabolism
fva01100
Metabolic pathways
fva01240
Biosynthesis of cofactors
Module
fva_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
FV113G1_26320 (pdxS)
Enzymes [BR:
fva01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
FV113G1_26320 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
TetR_C_27
His_biosynth
NanE
Motif
Other DBs
NCBI-ProteinID:
BBA52282
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Position
2924075..2924950
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AA seq
291 aa
AA seq
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MSRYDLNKNLAQMLKGGVIMDVTTAAEAKIAEEAGACAVMALERVPADIRKNGGVARMSD
PKMIKEIQAAVSIPVMAKVRIGHFVEAQILEALEIDYIDESEVLTPADDRFHVDKTLFKV
PFVCGSRNLGEALRRISEGASMIRTKGEPGTGDVIEAVKHMRTLNEDIRKVVSSPESELY
HVAKELEAPYDLVKYVHDNGKLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGD
PAKRAAAIVKAVTNYNNPKILAEISEDLGEAMVGINVYSLAEDEKMAKRGW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagatatgatttaaataaaaatttagctcaaatgttaaaaggtggagtaataatg
gatgtaactacagctgctgaagctaaaatagcagaagaagctggtgcatgtgcagttatg
gctcttgaaagagttcctgctgatataagaaaaaatggtggagtagcaagaatgtcagat
cctaaaatgataaaagaaatacaagctgctgtttctattccagtaatggctaaagtgaga
ataggtcattttgtagaggctcagatacttgaagcacttgaaatagattatattgatgaa
agtgaggttcttactcctgctgatgatagattccatgtggacaaaacattattcaaagtt
ccttttgtatgtggttcaagaaatctaggtgaagctttgagaagaatatctgaaggagca
agtatgataagaactaaaggagaaccaggaactggtgatgtaatagaagccgtaaaacat
atgaggacattaaacgaagatatcagaaaagttgtatcttcccctgaatctgaactttat
catgttgcaaaagaattagaagctccatatgatttagtaaaatatgttcatgataatgga
aaattgccagttgttaattttgctgctggtggtgtagctactcctgctgatgcagctctt
atgatgcagcttggatgtgatggtgtctttgttggatctggtatattcaaatctggtgat
cctgctaaaagagctgctgctatagtaaaagctgtaactaattataacaatccaaaaatt
cttgctgaaatatcagaagatttgggagaagcaatggtaggtattaatgtttattcactt
gcagaagatgaaaaaatggctaaaagaggttggtag
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