Fusobacterium varium: FV113G1_26480
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Entry
FV113G1_26480 CDS
T05280
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fva
Fusobacterium varium
Pathway
fva00260
Glycine, serine and threonine metabolism
fva00460
Cyanoamino acid metabolism
fva00630
Glyoxylate and dicarboxylate metabolism
fva00670
One carbon pool by folate
fva00680
Methane metabolism
fva01100
Metabolic pathways
fva01110
Biosynthesis of secondary metabolites
fva01120
Microbial metabolism in diverse environments
fva01200
Carbon metabolism
fva01230
Biosynthesis of amino acids
fva01240
Biosynthesis of cofactors
fva04981
Folate transport and metabolism
Module
fva_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FV113G1_26480 (glyA)
09102 Energy metabolism
00680 Methane metabolism
FV113G1_26480 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FV113G1_26480 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FV113G1_26480 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FV113G1_26480 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FV113G1_26480 (glyA)
Enzymes [BR:
fva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FV113G1_26480 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BBA52298
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Position
2938772..2940022
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AA seq
416 aa
AA seq
DB search
MKDLEKLFIDDKEIYDAIEAEKKRQNEGIELIASENFVSESILEAAGSVMTNKYAEGYPD
KRYYGGCECVDIAEKLAIERAKKLFDVKFVNVQPHSGSQANMGVYKALLNIGDTILGMKL
DHGGHLTHGKNVNFSGKDYNVYSYSVKKDDEYIDYDEVEKLALEIKPKLIVAGASAYSRT
IDFKKFREIADKIDAILMVDMAHIAGLVAAGEHPSPIPYAHVVTTTTHKTLRGPRGGVIM
TNDEEIAKKIDKAIFPGIQGGPLMHIIAAKAVAFKQALEPEFKEYQKQVVKNAKVLAEVL
NAGGLRVVSGGTDNHMVLIDVKANKNLTGAQVEKALGKAGITVNKNGIPYDTEKPMVTSG
IRIGSPAMTTRGMKEEEMKQIANFILQVVDNINDDKKLIEIREQVKELCLKFPLYN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttagaaaaactttttattgatgacaaagagatctatgatgccatagaagcc
gagaaaaaaagacaaaatgaaggaatagaacttatcgcttcggaaaactttgtatcagaa
tcgatattagaagcagctggaagcgtaatgactaataaatatgctgaaggttaccctgac
aaaagatactatggtggatgtgaatgcgtagatatagctgaaaagttagcaattgaaaga
gcaaaaaaactttttgatgtaaaatttgttaatgtacagcctcactctggctctcaagcc
aatatgggagtatataaggctcttttaaatataggagatactatcttaggaatgaaatta
gatcatggtggacatttaactcatggtaaaaatgtaaatttctctggaaaagattataat
gtctattcttatagcgtaaaaaaagatgatgaatatatagactatgatgaagttgaaaaa
cttgcactggaaattaaaccaaaacttattgttgctggagcaagtgcatattctagaaca
atagactttaaaaaatttagagaaatagctgataaaattgatgctatacttatggtggat
atggctcatatagctggtttagttgctgctggggaacatcctagtcctattccttatgct
catgttgttactacaactactcacaagacattaagaggtcctcgtggcggagtaataatg
actaatgatgaagagatagctaaaaaaatagacaaagctatatttcctggaatacaaggt
ggcccactaatgcatataatagccgcaaaagctgttgcatttaaacaggctcttgaacct
gagtttaaagaatatcaaaaacaggttgttaaaaacgctaaagtgctagctgaagtttta
aatgctggtggattgagagtagtaagcggaggaactgataatcatatggttcttatagat
gtaaaagctaacaaaaatcttactggtgctcaagtagaaaaagctttaggtaaagctgga
attacagttaataaaaatgggattccatatgatactgaaaaacctatggttacaagtggt
ataagaattggctctcctgctatgactactagaggtatgaaagaggaagaaatgaaacaa
atcgccaattttatccttcaggtagtagataatataaatgatgataaaaaattaattgaa
attagagagcaagtaaaagaactttgtttaaaatttccattatataactaa
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