Fusobacterium varium: FV113G1_27110
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Entry
FV113G1_27110 CDS
T05280
Name
(GenBank) putative transcriptional regulator
Organism
fva
Fusobacterium varium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Response_reg
AAA_16
AAA_7
AAA
AAA_5
AAA_22
AAA_2
Lig_C
AAA_24
6PF2K
HTH_50
bHLH_INO2
Motif
Other DBs
NCBI-ProteinID:
BBA52360
LinkDB
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Position
complement(3011811..3013202)
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AA seq
463 aa
AA seq
DB search
MILLGFRLDRSLKEELENNFENELTFAENITDFIEYLKNKKYETIVIEERNLQEEALINL
VKKVGEHQKKGVIIILGETSNLKVVAGSVKAGAYDYILKPVDNNTVIKIIEKSVKDYKLL
AERVDKHKSSGDKLIGQTKEIVELYKMIGKVASSRVPVLVVGEKGTGKTSVAKSIHQFSD
WSNQPLISINCTSFQNELLERKMFGYEKGAFTGAVFSQIGDLEKANGGTLHLGNVESLSL
DLQSKILYFLEEGEFFRMGGADPIKIDLRVVASTSENLEELINQGKFIDELYRKLKVLEV
NIPPLRERKDDIPLIIDHYLIECNEELHKNVKGVSKPALKKILRYDWPGNVNELKNAIKS
AVALCRGGSILIEDLPSNVLGTRVTKRKGDAQTSALKEWIKVEMEMYKTSNQKGYYGNII
SKVEKELIHQVLEMTNGKKVETAEILGITRNTLRTKMSNYGLE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgattcttttagggtttagattagatagaagtttaaaagaagaattagaaaataatttt
gagaatgaattaactttcgcagaaaatataactgattttatagaatatctaaaaaacaaa
aagtatgaaactatagttatagaagaaagaaatcttcaagaagaggctcttattaattta
gtaaaaaaagtgggagaacatcaaaaaaagggtgttataataattcttggagaaacttct
aatttaaaagtagtagcagggagtgtaaaagctggagcatatgattatatattaaaacca
gttgataataacactgttataaaaataatagaaaaatctgtaaaagattataaattgtta
gctgaaagagtagataaacataaaagttctggtgataaacttataggacaaacaaaagaa
atagtagaattatataaaatgataggaaaagttgcaagcagcagagtacctgttctagta
gtaggagagaagggaactggaaaaacaagtgtagcaaaatccattcatcagtttagcgat
tggtcaaatcagccacttataagtataaactgcacttcttttcaaaatgaattactggaa
aggaaaatgtttggatacgaaaaaggagcatttactggagctgttttttctcaaataggt
gatcttgaaaaagctaatggaggaactcttcatttaggaaatgtagaatctttgagtttg
gatttacaatctaagatactttatttcttagaagaaggagaattttttagaatgggagga
gctgaccctattaaaattgatttaagagtagttgctagtacaagtgagaatcttgaagaa
cttataaatcaaggtaaatttattgatgaactgtatagaaaactaaaagttcttgaagta
aatattccaccattaagagaaagaaaagatgatatacctttaataatagatcattatttg
atagagtgcaatgaagaacttcataaaaatgtaaagggtgtaagtaaaccagctttgaaa
aagatattgagatatgactggcctggaaatgtaaatgaacttaaaaatgcaattaagtct
gctgtagcgttatgtagaggtggttctatactcatagaggatcttccaagtaatgtgttg
ggaacaagagttacaaaaagaaaaggggatgcacaaacaagtgctcttaaggaatggata
aaagtagagatggagatgtataaaacaagtaatcaaaaaggctactatggaaacatcatt
tcgaaagtcgaaaaagaacttatacatcaagtattggaaatgactaatggcaaaaaagta
gaaacagcagaaatattaggaataacaaggaatacattaaggacaaaaatgagtaactat
ggtttggagtag
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