Fusobacterium varium: FV113G1_28700
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Entry
FV113G1_28700 CDS
T05280
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fva
Fusobacterium varium
Pathway
fva02024
Quorum sensing
fva03060
Protein export
fva03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FV113G1_28700 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FV113G1_28700 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FV113G1_28700 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fva02044
]
FV113G1_28700 (ffh)
Enzymes [BR:
fva01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FV113G1_28700 (ffh)
Secretion system [BR:
fva02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FV113G1_28700 (ffh)
Eukaryotic Sec-SRP protein
FV113G1_28700 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
CLP1_P
AAA_16
APS_kinase
ParA
ATPase
nSTAND3
NPHP3_N
ABC_tran
AAA_33
AAA_31
DnaB_C
KAP_NTPase
AAA_30
Thymidylate_kin
TsaE
KTI12
YqeC
ArsA_ATPase
ATP_bind_1
AAA_14
6PF2K
CBP_BcsQ
cobW
AAA_17
MobB
VapE-like_dom
DO-GTPase1
ResIII
NTPase_1
AAA
TPP_enzyme_M
PIF1
NACHT
nSTAND_NTPase7
AAA_18
MMR_HSR1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBA52519
LinkDB
All DBs
Position
complement(3199943..3201283)
Genome browser
AA seq
446 aa
AA seq
DB search
MLDNLGSRFQEIFKKVRGHGKLSESNIKEALKEVRMSLLEADVNYKVVKDFTNKILEKSI
GTDVLKGINPGQQFIKVVNDELVELLGGTNSRLTKGVRNPTVLMLSGLQGAGKTTFAAKL
ANYLKKQGESVLMVGADVYRPAAIKQLQVLGEQIDVPVYAEEDNKDAVAICEHGLAKAKE
LNSTYMIIDTAGRLHIDEKLMDELRNIKKAVRPQEILLVVDAMIGQDAVNLAESFNNVLS
IDGIVLTKLDGDTRGGAALSIKSVVGKPIKFVGVGERIDDIELFHPERLVSRILGMGDVV
SLVEKAQSAIDEDDAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKMIPGMGQIGD
IAPAEKEMKKVEAIIQSMTKEERKKPDILKANRKRRIALGSGTEVADINRLLKQFEQMKS
MMKMFSGGKMPQFPGMKGGKGGRFPF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttagataatttaggttctagatttcaggaaatttttaaaaaagtaagaggtcatgga
aaactaagtgaaagtaatataaaagaagctttaaaagaagtaagaatgtcattgctggaa
gctgatgtcaattacaaagtagtaaaggattttacgaataaaatacttgaaaaatctata
ggaacagatgtattgaaaggtataaatccaggtcagcagtttataaaagttgttaatgat
gaacttgttgagcttcttggaggaacgaattcaagacttactaagggagtaagaaatcct
actgtactgatgctttctggattgcaaggagcaggaaaaactacttttgctgcaaaatta
gctaattatctaaaaaaacagggagaatctgttttaatggtaggggctgatgtatataga
ccagcagctataaagcaacttcaagtattaggagaacaaatagatgttcctgtatatgca
gaggaagataataaagacgcagtggctatttgtgaacatggactggctaaagcaaaagag
ttaaattcaacatatatgataatagatacagctggaagacttcacatagatgaaaaactt
atggatgaacttagaaacattaaaaaagctgtaagacctcaagaaattttgttggtagta
gatgctatgattggacaggatgctgtaaatctagcagaatcttttaacaatgtgcttagt
atagatggaatagtacttacaaaattagatggagatacaagagggggagcagctctttca
attaaatctgttgtgggtaaaccaattaagtttgtaggggttggagagagaatagatgat
atagagcttttccatccagagagacttgtatcaaggatcctaggaatgggagatgtagta
tcgctggtagaaaaagcacaaagtgctatagatgaagatgatgcaaagtcgctggaagag
aaaataaggacgcaaaaatttgatttaaatgattttttgaaacagcttcagaatataaaa
aaattgggttctcttggaagtattttaaaaatgataccaggaatgggacaaattggagat
atagcacctgctgaaaaagaaatgaaaaaagtagaagctataattcaatctatgactaaa
gaagagagaaagaaacctgatatacttaaggccaatagaaaaagaagaatagctctagga
agcggaacagaagttgctgatatcaacagattgctgaaacaatttgaacaaatgaagagt
atgatgaagatgttcagtggtggaaaaatgccgcaatttccaggaatgaaaggtggaaag
ggaggaagattccctttttaa
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