Fusobacterium varium: FV113G1_30230
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Entry
FV113G1_30230 CDS
T05280
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_30230 (radA)
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FV113G1_30230 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
Lon_C
ChlI
DUF7125
DnaB_C
AAA_22
nSTAND3
SLFN-g3_helicase
AAA_16
nSTAND_NTPase5
AAA_14
AAA_24
NTPase_1
GvpD_P-loop
AAA
ABC_tran
ATPase_2
zf-RING_10
AAA_29
RecA_N
KdpD
Rad51
NB-ARC
DUF7129
AAA_19
NACHT
AAA_5
AAA_28
RsgA_GTPase
Zeta_toxin
AAA_30
CobU
MeaB
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BBA52672
LinkDB
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Position
complement(3359782..3361173)
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AA seq
463 aa
AA seq
DB search
MAKNKSFYVCSECGYKSSKWMGKCPQCNEWGTFEEEIEITSAGAPVVSSAVSVKETSEKV
YSFSDIKMEDMYRYKTGVEEFDRVLGGGLLQGEVVLVTGNPGIGKSTLLLQVADKYTSYG
TVIYISGEESPSQVKNRGERLKISAKDLFLMAETDVSNIYEYLIAKKPKVVIVDSIQTLY
NSSIDSIPGTPTQIRECTLKIIELAKKYNISFFIVGHITKDGKVAGPKMLEHMVDAVFNF
EGEEGLFYRILRSTKNRFGSTNELAVFSMEEDGMKEIKNSSEYFLSERDEKNAGSMVVPV
LEGTKVFLLEIQTLLTESSIGIPKRIVQGFDRNRIQILTAIAEKKMNMSLAMKDMFVNIP
GGLNIEDPAADLAVLISLLSVYRGVEISQKIAAIGELGLRGEIRKVFFIEKRLKELEKLG
FKGVYIPEANKKEIEKNSHKYKLKLIYLKNLEELLERMNKDGQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaataaaagtttttatgtttgcagtgaatgtggatataaatcatctaaatgg
atgggaaagtgtcctcaatgcaatgaatggggtacttttgaagaagaaatagagataaca
tcagcaggtgctcctgtagtttcttcagctgtttctgtgaaagaaacttctgaaaaagta
tattcattttcagatataaaaatggaagatatgtataggtataaaaccggagtagaagaa
tttgacagagtacttggaggaggacttcttcaaggggaagtagtcttggtaacaggaaat
cctgggatagggaaatcaacgcttctgcttcaagttgctgataaatatacatcctatgga
acagtcatatatatttcgggagaggagtcaccttctcaagtaaaaaatagaggagaaaga
cttaaaataagtgctaaagatttattccttatggctgaaacagatgtttcaaatatctat
gagtatcttatagctaaaaaacctaaagtagtaatagtagattcaatacagacattatat
aattcatcaatagactcgataccaggtacacctacacaaatcagagaatgtactttaaaa
ataattgaacttgctaaaaaatataatatatcattttttatagtaggacatataactaaa
gatggaaaagtagcagggccaaaaatgcttgaacacatggtggatgctgtatttaacttt
gaaggagaagaggggcttttttacaggattttaagaagtactaaaaatagatttggatca
actaatgaattggctgtttttagtatggaagaagatggaatgaaagaaataaaaaattct
tcagaatactttttgagtgaaagagatgaaaaaaatgcaggaagtatggtagttccggtt
ttagaaggaacaaaggtatttcttttagaaatacagacacttcttacagaatcaagcata
gggatacccaaaagaatagttcaaggatttgacagaaacaggatacaaatacttactgca
atagcagaaaaaaagatgaatatgagccttgccatgaaagatatgtttgtaaatattcca
ggaggcttgaatatagaggatccagcagcagatttagctgttctcatatcactcttgtct
gtatacagaggtgtggaaataagtcagaaaatagcagctattggagagttaggattgaga
ggggaaatcagaaaagttttttttattgaaaaaaggctgaaagaattagaaaagttagga
tttaaaggagtatatattccagaagctaataaaaaagaaatagaaaaaaacagtcataaa
tataaattaaaattaatatatttaaaaaatttagaagaacttttagaaaggatgaacaag
gatggtcaataa
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