Fusobacterium varium: FV113G1_32590
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Entry
FV113G1_32590 CDS
T05280
Name
(GenBank) putative tRNA pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fva03016
]
FV113G1_32590
Enzymes [BR:
fva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FV113G1_32590
Transfer RNA biogenesis [BR:
fva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FV113G1_32590
Prokaryotic type
FV113G1_32590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
KH_2
KH_1
KH_KhpA-B
PKD_2
Motif
Other DBs
NCBI-ProteinID:
BBA52908
LinkDB
All DBs
Position
complement(3645553..3646404)
Genome browser
AA seq
283 aa
AA seq
DB search
MDIRTIEKSKKWGYMFYISYNGQKFQSFDEMDGKKSIKGKFKEIMKTIGFTWAKGIQQAG
RTDAKVSANENILYVSSNFNGDINKVQEQFNKNSDADLRVTMIKKTFPNIIFPDMIEKRE
YIYSYPEKFIKNTETEIKKICEELSGIYDVSEFTDKKGLELKEHIREVKVTYIKGKLIFI
GNSFMPKQVRIMSGYILTGKKEPLMGKYLTLEKIYLKNEMKNIIFQEILDKSEKNVIKIE
KTVDESLYIFYVSQGKRGEFIGKNGKNIKEMKKKYGDIVVREI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatataagaacaatagaaaaaagtaagaaatggggatatatgttctatatctcatat
aatggacaaaaatttcaatcttttgatgaaatggatggaaagaaaagtataaaaggaaaa
tttaaagagataatgaaaactattggatttacttgggcaaaagggatacagcaagcaggg
agaacagatgcaaaagtaagtgcaaatgagaatatcctctatgtcagtagtaattttaat
ggagacataaataaagtacaagagcagtttaataaaaattctgatgctgatttaagggtt
accatgataaaaaaaactttccctaatattatatttccagatatgatagaaaaaagagag
tatatatattcatatcctgaaaagtttattaaaaatacagaaacagaaataaaaaagatt
tgtgaagaacttagtggaatatatgatgtaagtgaatttactgataaaaaaggacttgaa
cttaaggagcatataagagaagtaaaggttacatatataaaaggaaaattaatatttata
ggtaattcttttatgcccaagcaagtaaggataatgtctggatatatactcacagggaaa
aaagaacctcttatgggaaaatatctgactcttgaaaaaatctatttaaaaaatgaaatg
aaaaatataatttttcaggaaattttagataaatcagaaaaaaatgtaattaaaattgaa
aaaacagtagatgaaagcttatatattttctatgtatctcaaggaaaaagaggggaattc
ataggaaaaaatggtaaaaatataaaagaaatgaagaaaaaatatggagatatagtagtg
agggagatctaa
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