Fusobacterium varium: FV113G1_34350
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Entry
FV113G1_34350 CDS
T05280
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fva
Fusobacterium varium
Pathway
fva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FV113G1_34350 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fva03021
]
FV113G1_34350 (rpoA)
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_34350 (rpoA)
Enzymes [BR:
fva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FV113G1_34350 (rpoA)
Transcription machinery [BR:
fva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FV113G1_34350 (rpoA)
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FV113G1_34350 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBA53083
LinkDB
All DBs
Position
complement(3846416..3847393)
Genome browser
AA seq
325 aa
AA seq
DB search
MLKIEKHARGINITEVKESEFKGQYIVEPLYRGYGHTVGNALRRVLLSSIPGAAIKGVRI
DGVLSEFSVMDGIKEAVTEIILNIKEIVVKAESTGERKMTLSVKGPKIVTAADIIPDVGI
EIVNPEQVICTITTDRELDMEFLVDTGEGFVVSEEIERKDWAVDYIAVDAIYTPIRKVSY
SVQDTMVGRMTDFDKLTLDIETDGSIEIRDALSYAVELLKLHFDPFLELGNKMENLRVEA
EEEEENPVSHAKDDNILNTKIEELDLTVRSFNCLKKAGIEEVSQLAKLSLNELLKIKNLG
RKSLDEILEKMKELGYDLSQNGSPE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattgaaaaacatgcaaggggtattaatattaccgaagtaaaagagagtgaa
tttaaaggacaatatattgttgaacctttatatagaggctatgggcatactgttggtaat
gctttgagaagagttttactttcttctatcccaggagctgctattaaaggagtaagaatt
gatggtgttttaagcgaattttctgttatggatggaataaaagaagctgtaactgaaata
atccttaatataaaagaaatcgttgttaaagccgagagtactggagaaagaaaaatgact
ctttctgttaaaggaccaaaaatagtaacagccgctgatataatacctgatgtaggaata
gaaatagtaaatcctgaacaagttatttgtacaataactacagatagagaacttgacatg
gaatttttagttgatactggagaaggatttgtagtatcagaagaaatagaaagaaaagac
tgggctgtggattatatagctgttgatgctatctacactccaatcagaaaagtttcttac
agtgtacaggatacaatggtaggaagaatgactgattttgacaaacttactttagatatt
gaaactgatggaagtattgaaatcagagatgcactatcttatgcagtagaattattaaaa
ttacattttgatccattcttagaattaggaaacaaaatggaaaatctaagagtagaagct
gaagaggaagaagaaaaccctgtaagccatgcaaaagatgacaatattcttaatacaaag
atagaagaacttgatttaacagttagatctttcaactgtttaaagaaagctggaatagag
gaagttagtcaattggctaaactgtcacttaacgaacttctaaaaattaaaaatctggga
agaaaatctttagatgagatcctagaaaaaatgaaagaattaggatatgatctatctcag
aatggatctcctgagtaa
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