Fusobacterium varium: FV113G1_34850
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Entry
FV113G1_34850 CDS
T05280
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
fva
Fusobacterium varium
Pathway
fva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FV113G1_34850 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_34850 (mutS)
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FV113G1_34850 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Spectrin_SESTD1
DUF1776
DUF4288
Motif
Other DBs
NCBI-ProteinID:
BBA53132
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All DBs
Position
complement(3881186..3883522)
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AA seq
778 aa
AA seq
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MNRHSYTVLEFDKLREEISNYSAIEENHYKILGLEPFKDFSSLNRELDILRDFTDFLKFD
GGLETAGMKDICKMTKKSQLIGTYLDVEDLWDINHNLRLFRVFKNRLDDLNKYKDLRDKF
NDVPILRGVEDIINKAIDNNKEIKDDASLDLRDIRIHKKTLAMNIKRKFDELFNEPQFAK
VFQEKIITERDGRSVVPVKADFKGQIKGIEHDRSSSGQTVFIEPLSIVALNNKNRELEIR
EKEEIRKILLRITDYIRNSKDDIDRVGEAVITLDILNARAMYGIEKKCVVPNINNREILT
LVDARHPFIPVSSVVPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPA
HEHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTKASLVLLDELGSGTDP
AEGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLLI
GIPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDIMKKQVEFL
KEAAQRDKEVFEEKLRVLEKEKNDILREAYEKADKMMKEMQSKAAALVEKIQKEDNKKED
IKNVQKSLNMLRSALQDDKSKTVAEKPKVARKVDFKVGERVFVNSLNQFANVLKINLSKE
TVQVQAGILKLEVSLDDIKVVEEKKQKVYNSFSHKKTAVRSEIDLRGKMVDEAVYELETY
LDRAVMNSYNEVYVIHGKGTGALREGILNYLKNCPYVKEYRIGGHGEGGLGCTVVTLK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacatagttatacagttttggaatttgataaactaagagaagaaatttcaaat
tatagtgctatagaagagaaccattataaaatattggggcttgaacctttcaaagatttc
agctctttaaatagagagcttgatatcttaagagatttcacagattttttgaaatttgat
ggcggattagaaacagctggaatgaaagatatttgtaaaatgacaaaaaaatcacagctg
ataggaacatatctggatgtagaagatttatgggatataaatcataatctgagacttttc
agagtttttaaaaacagactggatgatctgaacaaatataaagatttaagagataaattt
aatgatgtacctattttaagaggagtagaagatattattaataaagctattgataataac
aaagagattaaagatgatgcttctcttgatttgagagacatcagaatacataaaaagact
cttgcaatgaacatcaaaagaaaatttgatgaactttttaatgaacctcaatttgctaaa
gtatttcaggaaaaaataattactgaaagagatggaagaagtgtagttcctgtaaaagca
gactttaaagggcagataaaagggattgaacatgatagatcatcaagtggacagacagtg
tttattgaacctttgtcaatagtagctctaaataataagaatagagaattagagataaga
gaaaaagaagaaataagaaagatactgcttaggataactgattatataagaaacagcaaa
gatgatatagatagagtaggagaagctgttattactttggatatacttaatgccagagct
atgtatggtatagaaaaaaaatgtgtagtacctaatataaataacagagaaattttaact
ttagtagatgcaagacatccgtttatccctgtttcatcagttgttcctcttacctttgaa
ataggaaaagattataatactcttcttattacaggaccaaatacaggaggaaaaacagtt
gcattgaaaacggctggacttctgacattgatggctttgagtggaatacctattccagca
catgaacattcaagtattggattttttacaggagtctatgctgatataggtgatgaacag
agtatagaacagtcactatcttcattctctgctcatttaaaaaatgttcaggagatactt
gaaaatgtgacaaaagcttctcttgtattgctggatgaattaggatcaggaacagaccct
gctgaagggtcagcttttgctatggctgttatagattatctgaaagataaaaaatgtaaa
tcaataataactactcattatagtgaagtaaaagctcatgggtacaatgaagagggaata
gaaacagcatcaatggaattcaatgttgaaactctttctcctacatacagacttttaata
ggaattcctggagaaagtaatgcacttactattgccagaagacttggagtatctgaagag
gtgattaacaaagcaaagagttatataagtgatgataataaaaaaatagaaaaaatgata
agcaatattaaggataaggctgatgagcttgatattatgaaaaaacaggtagaatttctg
aaagaagctgcccagagagataaagaggtttttgaagaaaaacttagagttttggaaaaa
gaaaaaaatgacatattgagagaagcttatgaaaaagcagataaaatgatgaaagagatg
cagtctaaagcagcagctctagttgaaaaaatacaaaaagaagacaataaaaaagaagat
attaaaaatgttcaaaaaagtttgaatatgcttagatctgctcttcaggatgataaaagt
aaaacggttgcagaaaagccaaaagttgcaagaaaagtagattttaaagtaggagaaaga
gtatttgttaatagtcttaatcaatttgcaaatgtacttaaaataaatctttctaaagaa
acagtacaagtacaggcaggaatattaaaactggaagtatcacttgatgatataaaagta
gtagaagaaaaaaaacagaaagtatataattcattttcacataagaagacagctgtaaga
agcgaaattgatttgagaggaaaaatggtagatgaagctgtttatgaacttgaaacatat
ctggatagagctgttatgaattcatataatgaggtttatgtaatacatggaaaaggaact
ggagcacttagagaaggaatacttaattacctgaaaaattgtccttatgtaaaagaatat
agaataggaggacatggagagggaggattaggatgtacagtagtgactctgaaatag
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