Fragaria vesca (woodland strawberry): 101290845
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Entry
101290845 CDS
T02666
Name
(RefSeq) DDB1- and CUL4-associated factor 4
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101290845
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101290845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
101290845
NCBI-ProteinID:
XP_004295528
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Position
LG3:6177794..6184114
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AA seq
510 aa
AA seq
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MPQDLPGFYYDAERNRYFPNKGPVPGSRRANSAAASSSGSQKLNQIVKKCKRTKVKTTKL
LQARELYGNVIASGKGRCNFMEEYQKAQASHPVVWKYQGTNKLGDGALERINIDVQTGEG
LTDRNFLLAGGRDGSLSFFEFGKFEGDIHFGRKCLPDLVWPLLNKSQVECRKAPGHIWRP
AQNTQWMSSGISCIKTFGRHGTENEGSSIQNALVCTLGAEDRGGSVFVINLTELLEFRPN
RPILRRNIDEVATFNCTIWTADCRSDGRHAVIGTNLGAALVDLETGVKSWLLRGKSDVLA
QQLIHSGNVVLCGLRNGAIVTVDVREKREGFSARHASHRIQHSTLDSTLGKSTKQWFKLS
GNIHPSHTIKMPSSIACLVSLQFDDQYFLASSMDGTVKLYDHRIIQRGAVQTYEGHVNSH
TRLQLGVDPSERFFVSGGEDCNLRLWSIKSGELLFEDKLTNTVTSTVCWQKAESFNGVQD
ERRSYDNVKHDSLGAWLGSAEGIFYMDWEL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagatcttcctgggttttattatgatgcggagaggaataggtacttccccaac
aagggcccagtaccaggctctcgtcgtgctaattctgctgctgcttcttcttctggctct
cagaaactgaaccagatagttaagaaatgtaagcgaacaaaagtaaaaactactaagctg
cttcaggccagagagttatatggtaatgtcattgcttccggtaaagggaggtgtaacttc
atggaggaataccaaaaggcacaagcatcccatcctgtggtttggaagtatcagggaaca
aacaagctaggtgatggtgcgttagaacgaataaatattgatgtacagacaggagagggc
ctaactgatagaaattttctattagcaggtggcagagatggctctttgagtttttttgag
tttggaaaatttgagggggatatccatttcgggaggaaatgcttgccagatcttgtatgg
cctctcttaaacaaaagtcaagtagaatgtagaaaagcgcctggccacatatggagacca
gctcaaaatacacaatggatgtcatcaggtatatcttgtataaaaacatttggcaggcac
ggcacagaaaatgagggttctagcatccagaatgctctcgtatgtacgctgggagctgag
gaccgtggtggatcagtttttgtcattaaccttactgaactcttagaatttcgtccaaac
agacctatcttaaggcggaacattgatgaagttgcgactttcaattgtactatttggaca
gcagattgtagatcggatgggcgtcatgcagtgattggtaccaatctgggagctgctctg
gtggatctggaaactggggtgaaatcatggctgttgcgcggtaaaagtgatgttttggca
caacaacttattcactcgggaaatgtcgttttatgtggactcagaaatggagcgattgta
acagttgatgttcgtgagaaacgggaagggttttctgcgagacatgctagtcatagaata
cagcactcaactttggatagcactcttggaaaatctactaaacaatggttcaagctttct
ggaaatatacatccttctcataccataaaaatgccttcatctattgcatgtttagtatct
cttcagtttgatgatcagtacttcttggcaagctccatggatggaacggtgaagctttat
gaccatcgcataatccaaagaggagcagtgcaaacttatgaggggcatgtgaattcccat
actcgtttgcagcttggagttgatccatctgagcgattctttgtatcaggtggagaggac
tgcaatttaagactttggagtataaagtctggtgaactgctttttgaggacaagttaaca
aatacagtcacctcaactgtatgctggcagaaagctgaatcgtttaatggagttcaggat
gaaaggcgaagctatgacaatgttaaacatgatagcttgggggcttggcttggatcggca
gaaggaatattttacatggactgggaactttga
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