Fragaria vesca (woodland strawberry): 101291074
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Entry
101291074 CDS
T02666
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101291074
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101291074
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101291074
NCBI-ProteinID:
XP_004304764
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Position
LG6:complement(801904..803187)
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AA seq
427 aa
AA seq
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MAVFEWSKRMICSCVLALFVFSFIAETRTAPTALDDPEEVASMVSIIIRNSTERKLMQLR
GSPSSCVTGNAIDDCWRCDTNWLNNRKRLAACAIGFGRNAIGGRDGQFYVVTDPSDNDAV
NPRAGTIRHAVIQTEPLWIVFQRDMVIQLKQELIMNSYKTIDGRGANVHIANGACITIQN
IKHIIIHGLHIHGCRPTGNALVRSTPSHFGWRGMADGDAVSIFGSRDVWIDHNSLSKCAD
GLVDVVMASTAVTISNNDLWHHNEVMLFGHSNSYKGDKVMQVTVAYNHFGEGLRQRMPHC
RQGYCHVVNNDYSSGWGIYAIGGSANPTINSEGNRFVADPKRYPYSNQVTKRTSGDKSEW
KNWNWRSKGDLFLNGAYFVESGATGANSEAYAKASSDVKAQKSSKVRAITSAAGALVCRR
NRMCTRK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttcgagtggagcaagagaatgatttgttcgtgtgtattggctctcttcgtg
ttcagcttcattgccgaaacacgaactgcaccaacagcactcgatgaccccgaggaagtt
gcttccatggtctccattatcatccgaaacagcactgaaagaaagctcatgcaactccgg
gggtcaccctcatcatgtgtaaccgggaatgccatcgacgactgttggcgatgtgacacc
aactggttaaacaatcgcaagcgcctcgcggcctgcgccattggtttcggcaggaacgca
atcggcggccgcgacgggcagttctacgttgtcactgaccctagtgacaatgatgccgtc
aaccctagagctggaactattcgtcatgctgtaatacaaaccgagcccttatggattgtg
ttccagcgtgacatggtgatccagctcaagcaggagctcattatgaacagctataagacc
attgacggccgaggagccaatgttcacattgcgaatggagcatgcattacgatccaaaac
atcaagcacatcataatacatggcctccatatccatggctgcaggcctacggggaatgcc
ttggtgaggagcacaccgtcacactttggttggagaggaatggcagatggtgacgccgtg
tcgattttcgggtccagggacgtgtggattgatcacaactcgctatccaagtgtgccgac
ggcctcgtggatgttgtcatggcctcaactgcagtcacaatctcgaacaatgacttatgg
caccacaatgaggtcatgttgtttggtcacagcaactcttataagggagacaaggtcatg
caagtgactgttgcttacaatcactttggggaaggactacggcaaaggatgccacattgt
aggcaaggttattgtcatgtggtgaacaatgactacagcagtggctggggaatatatgcc
atcggcggaagtgcaaaccctaccatcaatagcgaaggcaaccgatttgtggctgatccg
aaaaggtacccttattccaatcaggttaccaagaggacatcaggtgacaagtcggagtgg
aagaactggaattggaggtctaaaggagatttgttcttgaatggtgcctactttgttgag
tctggggcaaccggagctaactcggaggcctatgctaaggcctcgagcgatgtcaaagct
cagaaatcatccaaagtcagagccataacttctgctgccggcgcactcgtctgccggaga
aaccgtatgtgcactaggaaatag
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