KEGG   Fragaria vesca (woodland strawberry): 101291337
Entry
101291337         CDS       T02666                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fve03041]
    101291337
Spliceosome [BR:fve03041]
 Complex B
  Other components
   Complex B specific factors
    101291337
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd LisH_TPL Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_Vps41 VPS8_N DUF7165 Beta-prop_IFT122_2nd zf_topless PD40 Mala_s_1-like
Other DBs
NCBI-GeneID: 101291337
NCBI-ProteinID: XP_004299876
LinkDB
Position
LG5:complement(15417933..15428437)
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFVADVNSGRWDAV
LPQVAQLKLPRNKLEDLYEQIVLEMIELREVETARSILRNTQVMGVMKQEQPERYLRLEH
LHARTYFDPNEAYQDSTKEKRRAQIAQALSAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLQHTIKFGTKSHAECARFSPDGQFLVSTSFDGFIEV
WDYISGKLKKDLQYQADEAFMLHDDPVLCADFSRDSEMLASGDQYGKIKVWRIRTGQCLR
RLEHAHSKGVTSVTFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNNAIFTSD
GARVITASSDCTVKVWDSKSADCLQTFKPPPPLRGGDASVNSVHLFPKSNDHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFLAACVSPKGEWIYCVGEDSNLYCFSYQSGKLEHLL
KIHDKDVIGLAHHPHRNLLATFGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgaccttggaaatcgaagctcgagatgtgataaagattgtgcttcaattctgcaaa
gagaattcgctgcaccaaacgtttcagacgttacagagcgagtgccaggtttcgctgaac
actgttgatagtgttgagacttttgtggctgatgttaatagtggaaggtgggatgcggtt
ttgcctcaggtggctcagcttaaactgcccaggaataagttggaggatttgtacgagcag
attgtactggaaatgattgaacttcgagaagtggagactgctcgttctattttaagaaac
actcaggtaatgggtgtaatgaaacaagaacaaccagaaagatacttgcgactggagcat
ctccatgccagaacttatttcgacccaaatgaggcttatcaagattcgacgaaagagaaa
cggcgtgcacaaattgctcaagcactttctgccgaagttactgtggtgccaccttcaaga
ttaatggctctaatcggtcaggctctaaagtggcagcagcaccaaggattactgcctcca
ggaacacagtttgacttatttaggggaacagcagctatgaaacaggatgtggatgacttg
tatccaacaactcttcaacacacaattaagtttggaaccaaaagtcatgcagaatgtgct
cggttctcaccagatggccagtttctggtgtctacctcttttgatggatttattgaggta
tgggattacataagtgggaaactcaagaaggaccttcagtaccaggctgatgaagctttc
atgctccatgatgatccagtcctgtgtgctgattttagcagagactcagagatgcttgca
tctggggatcaatatggcaagatcaaagtttggcgtattaggacaggtcagtgcttgcgg
cgtcttgaacacgcacattcaaagggtgtcaccagtgttaccttctctcgagatggaagc
caaatacttagtacttcatttgacagcactgcaaggatacatggcttgaaatctgggaag
ctgttgaaagaattccgcggtcattcatcttatgttaataatgcaatctttacaagtgat
ggtgctcgcgtaattactgcatctagtgattgcacagtcaaggtctgggattcaaagagt
gccgactgtctacagacatttaaaccacctcctccgttaaggggaggtgatgcttccgtg
aattctgttcatcttttcccaaaaagtaatgatcacattgttgtatgcaataagacttca
tcaatatatatcatgacacttcaaggacaggttgtgaagagtttttcatctggtaaaaga
gaaggtggagattttctggccgcttgtgtgtcaccaaaaggggaatggatttactgtgtt
ggtgaagacagcaatctgtattgtttcagttaccaatctggaaagttagagcatttattg
aagattcatgataaggatgtcattggtctcgctcatcatcctcacaggaatcttcttgct
acatttggtgaagactgcacaatgaagttatggaagccttga

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