Fragaria vesca (woodland strawberry): 101291576 Help Entry 101291576         CDS       T02666                                  Name (RefSeq) uncharacterized LOC101291576   KO K24155   rabconnectin-3a Organism fve  Fragaria vesca (woodland strawberry) Pathway fve04142   Lysosome Brite KEGG Orthology (KO) [BR:fve00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     101291576  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:fve04131]     101291576 Membrane trafficking [BR:fve04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     101291576  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     101291576    RAVE complex     101291576 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT140_1st ANAPC4_WD40 EIF3I DUF2695 Motif Other DBs NCBI-GeneID:  101291576 NCBI-ProteinID:  XP_011468923 LinkDB All DBs Position LG7:3292412..3306284 Genome browser AA seq 2550 aa AA seqDB search MDPTHHLPLQILRSDPTPPAPNRSDPLGSAVDWLPDFLDLSWLAYGASSLLVVSHFPSPL SENETAIGPIFRQVFELSGDPSAAVKAVSWSPVTPSLGEVAAAAENCVWVFSHDSGSSKG SFCWSQNAVLVHSAKVEAIGWTGSGDGIIASGIEVVLWKRNGRSWEIAWKFKAEQPQSLV SATWSVEGPFATAAYQSKWLIEGLLTKEASKCVLVCQRDGKSEFIKSELQHPRPVSMIQW RPLTGIPLSRDAKHPSRHVLLTCCLDGTVRLWCEVDDGRARKVSKDINDHKTTRWSFSVA AVIEINQALNGILGIDIYVTWVIETGGVYKTSARAKQLFSAKGYEHDQVGNCEWLVGFGP GMLVKFWALHCLDDVSPVRFPRVTLWKTQELQVLERGDVHRTGLSNFKDRIPLNKVVISR NCLSGPPEVCSLIQLLPCNSLVWTLLYTQTSNNVGDLSLNKPGTENTLSCSAGGLLNLDG HAGRILQVAVHPYSCELELAVSLDSDGLLLFWFFSTISNHILGRPTLIPTWEIRGKLATQ SSCSRYTSVRWAPSIVNEVAVLLMGHAGGIDCFIVKIHQDEEQIIECHYLCTIPFTGHGP YEDGPNSISAIPLPPTCHEIQRCSKFMLIGVWMNGFEALSWEITLHTFDLSGGYCDCDFE TGYGPDSMWGFEGTFASIRYCLKVNACSSQIPDPYIHDEVTSFALVCPGSMMRIEKKLGP TIDQCSSCPAYLMATGCSDGTVKLWRSRIDKLSNPNIPWELVGMFLAHKGPISTVCLSDC GRKIATICKDFSSNTVGTLHIWSPIHLAGAGSFMLEDTLSFDQELVALKWLPLGNGQLLL GVCTLRQLRVYSIGRCGGQALLNPEKSVKKNIWVCIASTHTFPHICDFFWGPRATAVFIH KSYFCINSQWLFLVDKKHLADSQSNDMAESCMHSVGGMKEDTISAIFFDCELQQFDKTLL NESRRDCKSGTPFKTDLKKDYLSSSLFVASSQLDCAWGTKLGLWSMLEVLEKLSGSLPVY HPEALFMNIYSGNWKRAYIALRHLNDFLSSASSSGSKHYPSKSSSFVPQILLSTFLDGII SNDSNVKGFQWSGDAVTSSSQLQRDFGQFTYSLDSHASNNLFSSSSTKYGLVDFVDHLEK LYELAALTNTERMQILAIFDLLNEMTNSNSGSPYESLDEPGRRFWIALRFQQLHFFRKFG KSVSVEELVVDSKLIVWAYHSDCQENLFGSFLPNEPSWQEMRNLGVGFWFTNTAQLRSRM EKLARLQYLKRKDPKDCALLYIALNRIQVLSGLFKISKDEKDKPLVAFLSRNFQEEKNKA AALKNAYVLMGRHQLELAVAFFLLGGDTSSAVSICAKNLGDEQLAVVICRLTEGRGGPLE RHLISKSLLPFATERGDSWLASLLEWELGNYCQSFIRMLGLQINSATEMYATLSNGGAFS DPNVGLYCLLLTTKNSMRNAVGERNTAILSRWAVFMTATALKRCGLPIEALEYLSSATTI FGDTDQGTVADIGDFEKLHGILNPSPKNSSNWLSSNVVSHLEFHARLDLALQYLSTLVRE HPSWPDTVGASSRAISHINECENHEHVKVLQTFRQKLYAAVHHLEQKFSVVPFHLISMVL LSLYDCGLWFVGYEILHAYISQDQDLDKSQVFRFLLYPLMHMQLLKATRETSLLCSRVIA ACSITFSKLKPDCLEKNMSGDIGRACSNAWEYYFQGLILSIRSLRSALQIISVSSTEDLI MKPLVIIDWIEYYVQFAYAWLQNNSNVLILLMQPLLITFTNGHTPYEVDLLDLKKILLQI AESVPQNSLIDNVCTGLQGSQGTDVEHLIPQDERWQIVGVCLWQHISRLMKHKSGMLSNK LDDSCISGIPHGKKFSWMPCSENLGPDDNRVEELTGLVSLSMVKLLKTTLAHVSSYHVKR LVSHLQHKMDNGMHVMTLVWLEDYKQSQTRGLNQHLNQEMLKLETLGEKHGSDILWDTCA DPKIISESFAQEKVNWFQSLDHKPSKGWNNICRGITTVDETEETHNRELTPKSTSASSSE AGLPSRSLFRSGHSFLSGWQKDTTLTKEISPFLNPKEIYKRNGELLEALCLNSVNQKQAA IASNRKGILFFNWKDDMHDRDHSDFVWSEADWPLNGWAGSESTPAPTFVSPGVGLGIKKG SHLGLGGATVGVGSLARSARDLTVGGAFGNQGYPGMAVSGLGWETREDFEEVVDPPPTVE NANTRVFSSHPSRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAASVPPPYALASISALQ FDHCGHRFATAALDGTVCTWQLEVGGRSNIRPTESSLCFNSHASDVAYVTSSGSIIAVAG YSSSSVNVVIWDTLAPPTTSRASIICHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDVG LHDFRYIATGRSKRHRHTDKGEQAVKTSSNIDHHSGDGNRFGEQNQNGMLWYIPKAHSGS VTKISTIPNTSLFLTGSKDGDVKLWDAKRAKLVYHWPKLHERHTFLQPSSRGFGGVVQAA VTDIKVVSEGFLTCGGDGTVKLVHLKDHQY NT seq 7653 nt NT seq  +upstreamnt  +downstreamnt atggaccccactcaccaccttcctctccaaatcctcagatccgacccgactcctcccgcc cctaaccgatccgacccgctcggatccgccgtcgattggctcccggacttcctcgacctc tcatggctcgcctacggcgcctcctccctcctcgttgtctcccacttcccttcccctctc tccgaaaacgaaaccgccatcggtcccattttccggcaggttttcgagctctccggcgac ccctcggcggcagttaaagcagtgtcgtggtcgccggtgacgccgtcgcttggtgaggtc gctgccgcggctgagaattgcgtttgggtgttttcgcatgattcggggagctccaaaggt tctttttgttggagccagaatgcagtacttgtacactctgcaaaggtggaggcaattgga tggacgggatcaggggatggaattattgccagtggcattgaggtggttttgtggaaaaga aatggtaggtcttgggaaattgcttggaagtttaaagccgaacaaccgcaaagtttggtc tctgcaacttggtctgttgaaggaccttttgcaactgctgcttatcagagtaaatggctg attgaaggtttgttgactaaggaggctagcaaatgcgtgttagtatgccagcgagatggc aaatctgagtttattaaatctgagctacaacatcctcgtcccgtctcaatgattcaatgg aggccattaacaggaatacctttaagcagagatgcaaaacatccatcaaggcatgtgcta ctcacttgttgcttagatggaactgtcaggttatggtgcgaggttgatgatggacgggca agaaaagtttctaaggacattaatgatcacaaaaccacaaggtggtcattttctgtagcc gctgtaatcgagataaaccaggcactgaatggcattttgggcattgatatttatgttacg tgggtgatagaaactgggggtgtatacaaaactagtgcgagggctaaacaattattctct gcaaaaggttatgaacatgaccaggttggtaattgtgagtggttagttgggtttggtcct ggaatgctagtgaagttttgggctttacactgtctcgatgatgtctccccagtaagattt ccccgggttacattatggaagacacaagaactacaagtcctggaacgtggagatgttcat aggactggactttcaaattttaaagatagaataccacttaataaagttgttatctcgagg aactgcttgtctggtccaccagaagtctgctctttgattcagttgttaccttgcaattca ttggtttggacactgttgtatactcaaacatcaaataatgtaggggatctttcgcttaat aaacctggtacggagaacactttatcatgttcagctggtgggctcttgaatttggatggt catgctggaagaatcttacaagtggcagtacatccttatagttgtgagcttgaacttgct gtctccttagattctgatggattgcttcttttttggtttttctctaccatttccaaccat atcttgggccgtccaacactaattccaacgtgggaaatccgtgggaagcttgcaactcaa agttcatgttccagatatacaagtgtgcggtgggcaccgtcaatagtaaatgaagtagct gttcttcttatgggacatgctggaggaattgattgctttattgtaaaaattcatcaggat gaggaacaaattatagaatgtcactacttatgcactataccttttacaggtcatggtcct tatgaggatgggcccaacagtatctctgcaattcctttgcctccaacttgtcatgaaatt caaagatgtagtaaatttatgcttataggtgtatggatgaatgggtttgaagctctttca tgggaaatcaccttacatacttttgatctatctggaggttactgtgactgtgattttgag actggatatggtcctgacagtatgtggggatttgaaggtactttcgccagtataagatat tgtctaaaagtaaatgcttgctcatcgcagatacctgatccatacatccatgatgaggtt acaagttttgctctggtctgtccaggtagtatgatgcgtattgaaaagaaattgggtcct actattgatcaatgctctagttgtcctgcttatttaatggcgacaggctgctcagatggt actgtgaagttgtggaggagtagaattgataaactatcaaatcctaacattccgtgggag cttgtgggaatgtttttggcacataaaggccctattagcactgtatgcttgtctgactgt ggtcggaagattgcaaccatctgcaaggatttttcttctaatactgttggcactcttcat atatggagtcctatacatcttgcaggtgcagggtcttttatgttagaagatacattatcc tttgatcaagaacttgttgctctgaagtggctgcctttgggaaatggtcagttactactt ggagtttgtacactgcgtcagttgcgagtatattctattgggcgttgtggtggtcaggct ctgttaaaccccgaaaaatcagtgaaaaagaacatctgggtttgcattgcctctactcat actttccctcacatttgtgacttcttttggggacccagagcaacagccgtctttattcat aagagttacttctgtataaatagtcagtggttgttccttgtagataagaaacatcttgct gatagtcagtcaaatgacatggcagaaagttgcatgcattctgtgggtggaatgaaagaa gacactatttctgcaatattctttgattgtgaacttcaacaatttgataaaacattactt aacgagagtagaagagattgcaagtctggtacaccattcaagactgatttgaaaaaggac tatctatctagcagcttgtttgtagcgagctctcaactggattgcgcttggggtactaag ctaggtttatggtcaatgcttgaagtgctggagaagttaagtggatctctgccggtttat cacccagaggccctctttatgaatatctattcaggaaactggaagcgcgcgtatattgca ttgaggcatcttaatgattttctctcttctgcttcttcatctgggagcaagcattaccct tcaaagtctagcagttttgttccacagattttgttgtcaacatttcttgatgggattatc tcaaatgattcaaatgttaaaggatttcaatggagtggtgatgcagtcacttcatcttct cagttgcagagagactttggccagtttacatacagtttggactctcatgcttccaataat ttgttcagttcatcttcaacaaaatatggacttgttgattttgttgatcatctagagaag ttgtatgaattagcagctctaaccaacactgagaggatgcagattcttgctatttttgat cttctcaatgaaatgactaattcaaactctggttctccatatgaaagtctggacgaacct ggacggaggttctggattgcattgaggtttcagcaactacattttttccggaagtttggt aaatcagtatccgtggaggaattggttgttgactctaagttgattgtatgggcctaccac tctgattgccaggaaaatttgtttggatctttcctacccaatgaaccatcttggcaagaa atgcggaatttgggtgtaggattttggtttacaaatacagcacaattgcgatcaaggatg gaaaaactagcaaggttgcaatatctgaagaggaaggatcctaaggattgtgcattgctg tatattgcactgaatagaattcaagttctatcaggacttttcaaaattagcaaggatgag aaggacaagcctttagtcgcgtttctttcacgcaattttcaggaagagaaaaacaaggca gctgccttgaagaacgcatatgtcttgatgggtaggcatcaactggagttggctgttgct ttctttctgcttggaggtgatacttcttctgctgtcagtatttgtgcaaagaaccttggg gacgaacagcttgcagttgtaatttgccggcttactgaagggcgaggtggaccattagag agacacttgatttcgaagtctctattaccatttgcaactgaaaggggtgactcctggtta gctagccttctggagtgggagctggggaactactgtcaatcttttataaggatgcttgga ctccagataaattctgcaactgagatgtatgcgactttgtccaatggtggtgctttttca gacccaaatgttggtctgtattgtctattgctaacaaccaagaacagcatgaggaatgct gtaggggagcgaaatactgcaatcctcagtaggtgggcagtatttatgacagctactgcc ttaaaaagatgtggacttccaatcgaagctttggagtacctttcatctgccacaaccatt tttggagacaccgatcaagggactgtagcagacatcggggattttgagaagctacatgga attctgaatccttctccaaagaattcttcaaattggttatcaagtaatgtggtatcccat ctggagttccatgccagattagatttggcacttcaatacttatcaacgttggtaagagag catccaagttggccagacactgttggtgcatcttccagagctatttcacatataaatgag tgcgagaatcatgaacatgtaaaagttcttcagactttccgccagaaattatatgcagca gttcatcatttggagcagaagttttcagttgttccttttcatctgatcagcatggtcctg ctttcattgtacgattgtgggctatggtttgttgggtatgaaatattacatgcatatata tcccaagatcaagatctcgataaaagccaagtatttagattcctattatatcctcttatg catatgcaacttttgaaggctaccagagaaacttcccttttatgttcacgcgttattgct gcctgcagcataactttctctaaactgaagccagattgtttagaaaaaaatatgtctggt gatattggacgtgcatgctcaaatgcttgggagtattactttcaaggtcttatactgtca attcggagtttaaggagtgctttgcaaattatttctgtctcgtctactgaagacctcatc atgaaaccccttgtcatcattgattggattgagtattatgtacagtttgcttatgcatgg cttcaaaacaactcaaatgttctcatcctattgatgcaaccgctgctgatcacatttacc aatgggcatacaccttatgaagttgatttgcttgatctgaagaaaatcctccttcagatt gcagaatcggtgccccaaaattctttgattgataatgtatgcacaggccttcagggctct cagggtactgatgtagaacatttaattccacaagatgaaaggtggcaaatcgtaggggtt tgtttatggcaacacatatccagactcatgaaacataagtcaggtatgttatctaataaa cttgatgacagctgtatttctggtattccccatggaaaaaaattctcatggatgccttgc tctgaaaatttgggtcctgatgacaacagagtagaagaactgactgggttggtttcattg tccatggttaagttattgaagaccacacttgcacatgtttcttcttatcatgtgaagcgt ctagtatcacatctgcagcataagatggataatgggatgcatgtaatgactcttgtttgg ttagaagattataagcagtctcagacaagaggcctcaatcagcatttgaatcaggagatg ctcaaattggagacattaggtgaaaagcatggatctgacatattatgggatacctgtgca gatcctaaaataatatctgagagtttcgctcaggaaaaagtaaactggtttcagtcgctt gatcataaaccgtctaaaggatggaataacatatgtagaggcatcactactgtagatgag accgaggaaactcataatcgtgaacttacacctaagagtacttctgccagtagcagtgaa gctggattaccttctagaagtctatttcgcagtggccactccttccttagcggatggcag aaagatacaacccttacgaaggagatctcgcctttcctgaacccaaaagaaatatataag agaaatggggagcttttggaggcattatgtctcaactctgttaatcagaaacaagctgct attgcaagcaaccgaaagggcatcctattttttaattggaaagatgatatgcatgataga gatcattcagactttgtctggtcagaggctgattggccactgaacgggtgggctggttct gaatcaaccccagccccaacatttgtgtctcctggtgttggtcttggaattaaaaaagga tcacaccttggactgggtggagcaactgttggtgtgggttctttagcaaggtcggcaaga gacttgacagttggaggagcatttgggaatcaaggatatcctggaatggctgtgtctggt ttaggttgggagactcgtgaggactttgaggaggttgttgacccaccacctactgttgag aatgcaaacacaagggttttttccagtcacccatcccgacctttcttcttagttggttcc agcaatacacacatttacttatgggagtttggcaaggacaaagctactgcaacttacgga gttctgcctgctgcaagcgtccctccaccttatgctcttgcatcgatatctgctttgcag tttgatcactgtggacacagatttgctaccgctgccttagatggaactgtatgcacatgg cagctggaggtgggaggaaggagtaatattcggcctacagaatcatctctgtgctttaac agtcatgcatcggatgttgcttatgtcacatcgagtggatcaatcattgctgtggctgga tatagctccagtagtgttaatgtggtcatatgggatacattggctccacctactacctca cgagcttccattatttgtcatgaaggtggtgcgcgctcgctttctgtgttcgacaatgac ataggaagcggatctatttcacccctgattgtgactggtggtaaaggtggtgatgttgga cttcacgacttccggtatattgctactggaaggagtaaaaggcacaggcatactgataaa ggtgaacaagctgtgaagacatcatcaaatattgaccatcattctggggatggtaacaga tttggggaacaaaatcagaatgggatgctatggtatataccaaaggctcactcagggagt gtcaccaagatatccacaattccaaataccagtttgttcttaacgggaagcaaagatgga gatgttaagctttgggatgccaagagagctaagttggtatatcactggccaaaattgcat gaaaggcacacgtttttgcaaccaagctctcgaggttttggtggagtagttcaggctgct gtcacagacataaaagttgtttcagaaggttttcttacatgcggtggagatggaactgta aagctggttcaccttaaagaccaccaatattag

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