Fragaria vesca (woodland strawberry): 101291588
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Entry
101291588 CDS
T02666
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101291588
Spliceosome [BR:
fve03041
]
Common components
Common spliceosomal components
General mRNP proteins
101291588
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
101291588
NCBI-ProteinID:
XP_004290736
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Position
LG2:complement(17587794..17596666)
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AA seq
588 aa
AA seq
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MDFDEYDYLEKTVENPEPLASKENANGGDETLKSGDKGRSRSSKHRSDDKDHDGERRSKR
SKSGDELHDHDRERERGSSHHRSQSRDRERDRHRSSREHRDKEDREKEDRNGKERDRKRD
REPDRDRDRDRRERDRDSEKDKEKERSRRSRSHSERHRSEREEREKSRDIEHKEKEKEKD
LREREKESRRYKEKKEEVTEPEADPERDQRTVFAYQICLKADERDVYDFFSRAGKVRDVR
LIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLRGQPVMVKPSEAEKNLVQSTSVVSG
VGGMIGPYSGGARRLYVGNLHTNIKEDDLRQVFGAFGAVELVQLPLDEANNCKGFGFVQF
QRLEDARNALSLNGQLEIAGRVIKVSAVTDQAGMQDAGANAGDFDDDEGGGLSLNARSRA
ILMQKLDRSGSGSSLAVNSTGLPVAPILGAAPGISSLVAPMASVPGLAGLGVPGLQIPTA
TVPSVDTIGVPSECLLLTNMFDPKEIEAEPDIDVDIKEDVQEECSKYGKLKHIFVDKNTA
GFVYLRFENTQAAINARQVLHGRWFAGKMITATFMSPQNYETKFPESR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgagtatgattatttagagaaaacagttgaaaatccggaacctctggca
tccaaggaaaatgcgaatggcggcgatgagactttgaaatcaggagataaaggccgcagc
cgaagttcaaagcataggagtgatgataaagatcatgatggggaacgtcgctcaaagcgt
tcaaaatctggagatgagttgcatgaccatgatcgggaaagagagaggggatcttctcat
caccgttcacagtccagagatagagaaagggaccgtcacaggagtagtcgggaacataga
gataaggaggacagagaaaaagaggataggaatgggaaggagagagataggaagagggac
agagaaccggatcgtgatcgagacagggataggagagagcgtgaccgcgatagtgagaag
gacaaggagaaggagcggtcacgccgaagcaggagtcattcagaaaggcatagaagtgag
cgggaagaaagagagaagagccgtgacattgagcataaagaaaaggagaaggagaaagat
ctacgggagcgggaaaaagaaagcagaagatataaagaaaaaaaagaagaagtgacagaa
ccagaggctgaccctgagagagatcagaggacagtatttgcttatcagatttgtctgaag
gcagacgaaagagatgtatacgatttcttctcaagagccggcaaggtccgcgatgtacgt
ctcattatggatcgcaactccagacggtccaagggagttgggtatattgagttctatgat
gcgatgtcagtacccatggctattgcactctctggtcagcctcttcgcggtcaaccagtg
atggtgaagccttcagaggctgagaagaatctggttcagtcaacttctgtggttagtgga
gttggtgggatgataggtccatattctggtggagctagacggctgtatgttggtaatcta
cacaccaacataaaagaagatgatctacgccaggtttttggagcttttggtgctgtagaa
ctggttcagttgcctcttgacgaagctaacaactgcaaaggtttcggatttgttcagttt
caacggcttgaagatgctagaaacgcactgagtttgaatggccaattggagattgctggt
cgagtaattaaggtatcggctgtgactgaccaagctggaatgcaagatgctggagcaaat
gctggtgattttgatgacgatgaaggtggtggtctgtcattgaatgcccggtcgcgagca
attctgatgcagaaactggatcgtagtggcagtggatcaagtcttgcggtcaatagcact
ggtctaccagtggcaccaatccttggagctgcaccaggaatttcttctcttgttgctccc
atggcctctgttcctggtcttgctggacttggtgttccgggtcttcaaattcctacagct
actgttccttctgtagatacaattggtgttccaagtgaatgcttactgttgacaaatatg
tttgatcccaaagaaattgaggcagaaccagatattgacgtggacattaaagaagatgtt
caggaggaatgttcaaaatacgggaagctgaaacatatttttgttgataagaatactgct
ggtttcgtgtacttgagatttgagaacacacaagctgcaataaatgctcgacaagttctc
catggccgatggtttgctgggaagatgatcacagctactttcatgtcgcctcagaactat
gagactaaatttcctgaaagccggtag
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