Fragaria vesca (woodland strawberry): 101291646
Help
Entry
101291646 CDS
T02666
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101291646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101291646
03036 Chromosome and associated proteins [BR:
fve03036
]
101291646
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101291646
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101291646
PBAF complex
101291646
GBAF(ncBAF) complex
101291646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
101291646
NCBI-ProteinID:
XP_004303978
LinkDB
All DBs
Position
LG6:complement(28251339..28254594)
Genome browser
AA seq
557 aa
AA seq
DB search
MSMNNNNPPKNLGASSSPFRNSGMVPPSMSANPSFPQQAQAQLGAGFQAQFQLSQAQAIA
QAQSKAQAQAHAHAQAQAQAQAQAHAQAQAQAAHAQFQAQLQAQAMSLNQNQAGSMGNSP
SYSTPGSGSVKRFPQKPPVRPPGLSPTNMISPIRTMDLSAANRKKKQKLPEKQLQDKVAS
ILPESALYTQLLEFEARVDAALTRKKVDIQEALKSPPSIQKTLRIYVFNTFANQVRSIPQ
KPNADPPTWTLKIVGRILEDGVDPDQPGVVQKSNPFYPKFSSFFKRVTISLDQRLYPDNH
IINWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYAPEKFKLSQPLMEVLGIEVETRPR
IIASIWHYVKARKLQNPNDPSFFNCDPPLQRVFGEEKMKFTMVSQKISQHLFPPQPIHLE
HKMRLSGNSPAGTACYDVLVDVPFPIQRELSALMANSEKNKEIDACDEAICGAIRKIHEH
RRRRAFFLGFSQSPVEFINALIESQSKDLKLVAGVASRSAEKERRSDFFHQPWVEDAVIR
YLNRKPVAGSDAPPGST
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaataataataacccacctaagaatcttggagcgtcttcgtcgccctttaga
aattccgggatggtgcccccatctatgtctgcaaacccttcatttccgcaacaggctcaa
gcacaacttggggctggttttcaagcacaatttcagctctcccaagcacaggcgattgcg
caggctcagtcaaaagcacaagctcaagcacatgcccatgcccaagcccaagcacaggct
caagcgcaagcacatgcccaagctcaggctcaagcagctcacgctcaattccaggctcag
ttacaggctcaggcgatgtcgctgaaccagaaccaagcaggttccatggggaattcaccc
tcatattctacgcccggaagtggaagtgtgaagcgcttccctcagaaacctccagtgcgc
cctcctggtctttctcctacaaacatgatctcacccattagaaccatggacctgtcagct
gctaatcgtaaaaagaagcagaagcttcccgaaaaacagctacaggacaaagtagcctcc
atattgcctgagtctgctctatacacccagcttcttgagtttgaggctcgtgtcgatgct
gcgcttacaagaaagaaagttgatatccaagaggctctgaagagccccccttctattcag
aaaacacttcgcatttatgtttttaacacctttgccaatcaggttcgttcaattccacag
aaaccaaatgctgatccccctacttggacacttaagatagttggaaggatcttggaagat
ggggttgaccctgatcagcctggggtggtccagaaatcaaatcccttttacccaaagttt
tcatctttcttcaagagagtaaccatttctttggaccagaggctatatcctgataatcat
atcattaactgggaaaatgcaaggtcacctgcaccacatgagggatttgaggtgaagaga
aaaggggacaaagagtttactgtgaatatacgcttggaaatgaattatgcgcctgagaag
tttaagctttcacaacctttgatggaagttcttggtattgaggtggaaactcgtccaaga
ataatagcttcaatctggcactatgtgaaggctaggaaattgcagaacccaaatgacccc
tctttctttaactgtgatccaccacttcaaagagtgttcggagaggaaaaaatgaaattt
actatggtgtcccagaagatatctcagcatctgtttccgccacaacctatacatttggag
cataagatgaggctttctggtaatagtccagctggaacagcatgttatgatgtgttggta
gatgtgccttttccaattcaaagggaattatctgctctaatggccaactcagagaaaaac
aaagaaattgatgcatgtgatgaagcgatatgtggagctatcagaaaaatccatgagcat
cgtcgcaggcgagcttttttccttggatttagtcagtcacctgttgaattcatcaatgcg
ctgattgaatctcaaagcaaagatttaaagcttgtagctggagtagcgagtcgtagtgct
gagaaagagcgccggtcagatttcttccatcaaccttgggttgaagatgctgttatccgc
tatttgaaccggaagccagttgcaggaagtgatgctcctcctggaagcacatga
DBGET
integrated database retrieval system
