Fragaria vesca (woodland strawberry): 101291780
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Entry
101291780 CDS
T02666
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101291780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101291780
03036 Chromosome and associated proteins [BR:
fve03036
]
101291780
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101291780
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101291780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_DCAF12
WDR90_beta-prop_4th
GH18_BT1044-like
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
101291780
NCBI-ProteinID:
XP_004309497
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Position
Un
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AA seq
342 aa
AA seq
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MSFFTNHNPNNSFEVAQPPTDSVSSLSFSPKSNLLVSTSWDNQVRCWDVQKIGTSIAATP
KSSYSHDQPVLCSMWKDDGMAVFSGGCDRQVKMWSLMSGGQPTTVAMHDAPIKEIAWIPE
LALLVAGSWDKTLKYWDLRQPNPVHTQLLPERCYALTVKYPLMVVGTADRNLIMFNLQNP
KTEFKRIISPLKYQTRCVAAFPDQQGFLVGSIEGRVGVQHLNEGQESKNFTFKCHRENNV
IYSVNSINFHPVYHTFATAGSDGSISFWDKDSKQRLKAMSKCNQPIPCSTFNNDGSIFAY
SVCYDWHKGAGNHNPSTAKTSIFLHLPQDADVKPKPKPAGRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttttcacgaatcacaatccgaacaattcctttgaggttgctcagcctccaacc
gattccgtttcaagcctcagtttcagtcctaaatcgaaccttctggtctctacttcctgg
gacaatcaggtgcggtgctgggatgttcaaaaaattggaacaagtattgctgctacaccc
aagagctcctattcgcatgaccagccggttttgtgctcaatgtggaaggatgatgggatg
gctgtgttctctggaggttgtgacaggcaagttaagatgtggtctttaatgtctggaggc
caaccgactactgttgctatgcatgatgcacccataaaagagattgcttggatacccgag
cttgcgcttttagtcgcaggaagctgggacaagactttgaagtattgggatttgaggcag
ccaaatccggtgcatacccaactacttcccgaacgctgttatgcactaacagtgaaatat
cctctgatggttgtgggaacagcagacagaaatctgatcatgtttaacttgcagaatcca
aagactgaattcaagagaatcatttcaccccttaagtatcagacaaggtgtgttgctgca
tttcctgatcagcaaggtttcttggttggttctattgaagggagggttggagtgcagcat
ctaaatgaaggacaggaaagtaaaaactttaccttcaaatgccacagagaaaacaatgtt
atttactcagtcaactctataaacttccatcctgtgtatcacacatttgctacagctggg
tctgatggttctatcagtttttgggataaggacagcaaacagagactcaaggccatgtca
aagtgcaatcaacccattccttgcagtactttcaacaatgatggttccatatttgcatac
tccgtttgctatgactggcacaagggtgcaggaaatcataatccttctactgcaaagaca
tcgattttcctccacttgccacaggatgctgatgtaaaacccaagccaaaacctgctgga
agaaggtga
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