Fragaria vesca (woodland strawberry): 101291794
Help
Entry
101291794 CDS
T02666
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101291794
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101291794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
101291794
NCBI-ProteinID:
XP_004292668
LinkDB
All DBs
Position
LG2:18274129..18276061
Genome browser
AA seq
465 aa
AA seq
DB search
MSMGLRSPNTVIARRLDAIILVGLVFLSCMSDGASRGHLFGAGALRRSLTDTTNRKVFDV
TAFGAKPESGKGRQMKELPGGGDPTKPQPDDGGDGDDNDTGMAFIKTWVAACRGEYKGPA
KVVVPKGTFLIGPVVFQGPCTSSKEPIMVEIQGEVKATTDLSDYTSPEWITFENVDGLIV
TGDGVMNGQGEKTWNGNGCDKDDCPHAPSNMKFIKVKNALIEKITSLNSKYFHYHITVSS
RVTIDSVHITAPGESPNTDGCHISDSDNVKVINSIIGTGDDCVSIGKGARQITVNNVTCG
PGHGISVGSLGKYKNEQPVVGVTVTNCKLVNTTNGARIKTWANNYGGDASGITFDNLVME
HVKAPIVIDQSYGTKKDPKNPNAGKQSLYKLHDIHFRNIKGTSSQNVAMSLACSATKPCE
GVELSEIDISYGGASNSKKTDIASECYNAKVTTKGKINPAAPACK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgggactgagatcgccgaacacggtcatcgcaaggagattagatgctattatt
ctcgtaggcttagtttttctttcttgcatgtccgatggtgcatcccgtggacatcttttt
ggggctggtgcactacgtcggagcctcactgatactacgaaccgaaaagtatttgacgtc
acagccttcggtgctaagcctgaatccggaaaaggtcgacaaatgaaagagcttcctggc
ggtggagatccaactaaaccacaacctgatgatggcggcgacggggatgacaatgatact
ggaatggcattcattaagacgtgggtggccgcatgcagaggagagtacaagggtccagca
aaggttgttgttccaaagggcacatttttgattggacctgtggtgttccaaggcccttgc
accagctccaaggagccaatcatggtggaaattcagggagaggtgaaagccaccaccgat
ttgagtgattacacctctcctgaatggatcacgttcgaaaatgttgacggtctgatcgtc
acgggcgacggagttatgaatggtcaaggcgagaaaacatggaacggaaatggctgcgat
aaggacgactgcccccatgccccatccaacatgaaattcatcaaggttaagaatgcactt
atagagaagatcacatccttgaacagcaagtacttccattaccacatcaccgtctccagc
agagttaccatagacagtgtgcacatcactgctcccggcgaaagccctaacaccgacggc
tgccacatcagtgattccgacaatgttaaagtgatcaacagcatcattggaaccggagac
gactgcgtttccatcggcaagggtgcccgccaaatcaccgtcaacaacgttacttgcggc
cctggccatggcatcagtgttggaagtcttggaaaatacaagaacgaacaacccgtggtt
ggtgttactgtgaccaactgcaaactggtgaacacaaccaacggcgccagaatcaaaact
tgggccaacaactacggaggagacgcaagcggaattacattcgataacctcgtcatggag
catgtgaaagccccaatcgtcatcgatcaaagctatggaaccaagaaagatccgaaaaac
cctaacgccggaaagcaatccctgtataagctccatgatattcacttcagaaacattaag
ggcacctcgtcgcaaaacgttgccatgtcactggcatgcagcgctacaaaaccttgtgag
ggggttgagttgagcgagatcgacatttcctacggaggcgccagcaactccaaaaagacg
gacattgcatcggaatgttacaacgcaaaggttacaactaagggcaaaataaatccagca
gcaccagcttgcaaataa
DBGET
integrated database retrieval system