Fragaria vesca (woodland strawberry): 101291886
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Entry
101291886 CDS
T02666
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03030
DNA replication
fve03410
Base excision repair
fve03420
Nucleotide excision repair
fve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101291886
03410 Base excision repair
101291886
03420 Nucleotide excision repair
101291886
03430 Mismatch repair
101291886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101291886
03036 Chromosome and associated proteins [BR:
fve03036
]
101291886
03400 DNA repair and recombination proteins [BR:
fve03400
]
101291886
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101291886
DNA Replication Termination Factors
ELG1-RFC complex
101291886
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101291886
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101291886
Check point factors
HRAD17(Rad24)-RFC complex
101291886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
AAA_11
PhoH
AAA_14
Mg_chelatase
AAA_assoc_2
AAA_5
AAA_24
AAA_2
ResIII
SLFN-g3_helicase
nSTAND3
AAA_28
DNAX_ATPase_lid
AAA_30
AAA_7
AAA_18
AAA_19
Gp44_lid
RNA_helicase
Ribophorin_II
TIP49
AAA_25
DUF815
bpMoxR
NPHP3_N
NB-ARC
IstB_IS21
T2SSE
AAA_17
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
101291886
NCBI-ProteinID:
XP_004290901
LinkDB
All DBs
Position
LG2:complement(19144165..19147782)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPKQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIARQLFGPELYKSRVLELNASDDRGINIVRTKIKDFAAVAVKSCKGQGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETYSRGSRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMI
TRVLHICQEEGLDLEPEALSTLSSISQGDLRRAITYLQSAARLFGSSITSKDLISVSGVI
PQEVVDSFFAACRSGNFDLANKEVNNVIAEGYPVSQMFSQLFDIVVEADDISDEQIARIC
KKLGEADKRLVDGSDEYLQLLDVASSTMRAICNMQEDFS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccactggtcccgagctcccagccatgggtcgagaaatatcgaccgaagcaagtg
aaagatgtggctcagcaggatgaggtggtccgcgtcctcaccaacacccttgagacctca
aattgtccgcatatgctgttctatggcccacctggcaccgggaaaaccaccaccgctctc
gccattgcccgccagcttttcggacctgaactctacaagtctagagttttggagctcaat
gcaagtgatgatcgtgggatcaatatcgtgcggacaaagattaaagactttgctgctgtg
gctgtgaaatcttgtaaagggcaggggggttacccttgtccgccatttaagattattatt
cttgatgaggcagattcaatgacagaagatgctcagaatgccctaagacgtacaatggaa
acttactccagaggctcaagattcttctttctatgtaattatatcagcaggatcatagag
ccacttgcatcgaggtgtgccaagttcaggtttaagccactttcagaagatataatgatc
acccgtgtgctgcacatttgccaagaagaaggactcgacctggagccagaggctctgtca
acattaagttctatctcacaaggtgatcttcgtcgagctatcacatatttgcagtcagct
gctcgcttgtttggatcttctattacttcaaaggacctgattagtgtctccggggtcatt
ccgcaggaggttgtcgattcattttttgctgcttgcagaagtggcaactttgatttggca
aacaaggaagtcaacaatgtaattgcagaaggatatccggtttctcagatgttttcacag
ttgtttgacattgtggtcgaagcagatgacatatcagatgaacagattgctagaatatgc
aagaaattgggcgaagcagataagcgtcttgttgatggcagtgatgagtacttgcagctg
ctggatgttgcaagcagtacaatgcgagctatctgtaacatgcaagaagatttctcttaa
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