KEGG   Fragaria vesca (woodland strawberry): 101291886
Entry
101291886         CDS       T02666                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03030  DNA replication
fve03410  Base excision repair
fve03420  Nucleotide excision repair
fve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101291886
   03410 Base excision repair
    101291886
   03420 Nucleotide excision repair
    101291886
   03430 Mismatch repair
    101291886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fve03032]
    101291886
   03036 Chromosome and associated proteins [BR:fve03036]
    101291886
   03400 DNA repair and recombination proteins [BR:fve03400]
    101291886
DNA replication proteins [BR:fve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101291886
  DNA Replication Termination Factors
   ELG1-RFC complex
    101291886
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101291886
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101291886
  Check point factors
   HRAD17(Rad24)-RFC complex
    101291886
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_22 Rad17 RuvB_N AAA_16 AAA_11 AAA_14 PhoH AAA_assoc_2 Mg_chelatase AAA_5 SLFN-g3_helicase AAA_24 AAA_2 ResIII nSTAND_NTPase5 nSTAND3 DNAX_ATPase_lid AAA_28 AAA_7 AAA_18 AAA_30 Gp44_lid AAA_19 RNA_helicase Ribophorin_II TIP49 AAA_25 DUF815 bpMoxR NB-ARC NPHP3_N AAA_17 Parvo_NS1
Other DBs
NCBI-GeneID: 101291886
NCBI-ProteinID: XP_004290901
LinkDB
Position
LG2:complement(19144165..19147782)
AA seq 339 aa
MAPLVPSSQPWVEKYRPKQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIARQLFGPELYKSRVLELNASDDRGINIVRTKIKDFAAVAVKSCKGQGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETYSRGSRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMI
TRVLHICQEEGLDLEPEALSTLSSISQGDLRRAITYLQSAARLFGSSITSKDLISVSGVI
PQEVVDSFFAACRSGNFDLANKEVNNVIAEGYPVSQMFSQLFDIVVEADDISDEQIARIC
KKLGEADKRLVDGSDEYLQLLDVASSTMRAICNMQEDFS
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccactggtcccgagctcccagccatgggtcgagaaatatcgaccgaagcaagtg
aaagatgtggctcagcaggatgaggtggtccgcgtcctcaccaacacccttgagacctca
aattgtccgcatatgctgttctatggcccacctggcaccgggaaaaccaccaccgctctc
gccattgcccgccagcttttcggacctgaactctacaagtctagagttttggagctcaat
gcaagtgatgatcgtgggatcaatatcgtgcggacaaagattaaagactttgctgctgtg
gctgtgaaatcttgtaaagggcaggggggttacccttgtccgccatttaagattattatt
cttgatgaggcagattcaatgacagaagatgctcagaatgccctaagacgtacaatggaa
acttactccagaggctcaagattcttctttctatgtaattatatcagcaggatcatagag
ccacttgcatcgaggtgtgccaagttcaggtttaagccactttcagaagatataatgatc
acccgtgtgctgcacatttgccaagaagaaggactcgacctggagccagaggctctgtca
acattaagttctatctcacaaggtgatcttcgtcgagctatcacatatttgcagtcagct
gctcgcttgtttggatcttctattacttcaaaggacctgattagtgtctccggggtcatt
ccgcaggaggttgtcgattcattttttgctgcttgcagaagtggcaactttgatttggca
aacaaggaagtcaacaatgtaattgcagaaggatatccggtttctcagatgttttcacag
ttgtttgacattgtggtcgaagcagatgacatatcagatgaacagattgctagaatatgc
aagaaattgggcgaagcagataagcgtcttgttgatggcagtgatgagtacttgcagctg
ctggatgttgcaagcagtacaatgcgagctatctgtaacatgcaagaagatttctcttaa

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