Fragaria vesca (woodland strawberry): 101291946
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Entry
101291946 CDS
T02666
Name
(RefSeq) probable pectate lyase 15
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101291946
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101291946
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
101291946
NCBI-ProteinID:
XP_004304984
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Position
LG6:4976549..4977793
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AA seq
374 aa
AA seq
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MAVSESNRYCLYACMSLLLITGNSIDDCWRCDPNWFYNRKRLADCAVGFGKEAKGGRDGR
FYVVTDSSDNDVVNPRPGTLRHAVIQTEHLWIVFSKDMLITLKQELIMNSFKTIDGRGVN
VEIAYGAGITIQYVTNIIIHGVHIHHCKPTGNAMMRSSPSHFGWRGMADGDAISIFGSKH
IWIDHNSLSNCDDGLVDVVQASTAVTISNNLFKHHDKVMLLGHSDAYTQDKVMQVTVAYN
RFGQGLVQRLPHCRHGSFDIVNNDYPKGWGVYAIGGSANPAINSQGNRFYADAVKHPYTN
QVTKRIVGSESEWKRWNWRSSGDLFLNGAYFVPSGDASSAAYVKASSTLAKPASMVRAMT
ANAGVLTCRKDQVC
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtctgagagtaatagatattgcctctatgcctgcatgtcgttgcttctaata
accggcaattccatcgatgactgctggcgttgtgatcccaactggttctacaaccgaaag
cgtctcgcggattgcgccgttggttttggcaaagaggccaagggtggccgcgatggacgc
ttttacgttgtcaccgactcgagcgacaacgatgttgtaaaccctagaccaggcactctc
cgccacgctgtcatccagaccgagcatctctggatcgttttctctaaggacatgttgatc
acactgaagcaggagctgatcatgaatagcttcaagaccattgacggccgcggagtcaac
gttgaaatagcttacggagcaggcataacgatccaatatgtcacaaacattatcatccat
ggtgtgcacatccaccactgcaagcctacaggaaatgctatgatgagaagctccccatct
cattttggatggagaggaatggcggatggcgatgccatctccatcttcggatcgaaacac
atatggatcgatcacaactcactctccaactgtgacgatggccttgtggatgttgtgcag
gcctcaactgcagttaccatttccaacaatctgtttaagcaccacgataaggtgatgctg
ttagggcacagtgatgcttatactcaagacaaggtgatgcaagtgacagttgcttacaac
cgtttcgggcagggattagtgcagagactgccgcattgtaggcacggcagtttcgatata
gtgaacaatgactaccctaaagggtggggggtatatgccattggaggatctgcaaaccct
gccatcaacagccaaggcaatagattctatgccgatgcggttaagcatccctatacgaat
caggttaccaagagaattgtgggaagcgagtcagaatggaagagatggaattggaggtcg
tcgggagatctgttcttgaatggcgcttactttgttccgtccggtgatgcaagttcggcg
gcctatgtcaaggcctctagcaccttagccaagccagcttccatggttagagccatgacg
gctaatgccggtgttcttacttgccgcaaagaccaagtttgctaa
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