Fragaria vesca (woodland strawberry): 101291986
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Entry
101291986 CDS
T02666
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fve01002
]
101291986
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101291986
Enzymes [BR:
fve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101291986
Peptidases and inhibitors [BR:
fve01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101291986
Ubiquitin system [BR:
fve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101291986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
101291986
NCBI-ProteinID:
XP_004291227
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All DBs
Position
LG2:complement(22565609..22570561)
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AA seq
713 aa
AA seq
DB search
MHVAGVSLDLNWFLHLIFTLFAIAFVLLHLVKNTASKYFEVDANFDGGADRTVTAQMPGV
PINDSACAVCGGDGVKKCSRCKAFRYCSQKCQTEHWRSGHKSECNDIAAGRISPAQNASS
NARFKTPVARKNFKGIALVPTHGIITKRFKQPKKILFPYDEFVKLFHWEKAGLPPCGLLN
CGNSCFANVVLQCLSSTRPLVAYLLEKGHRKECIRDDWCFLCEFESHLERASRSSQAFSP
TNIISRLPNIGGNLGYGRQEDAHELMRFAIDTMQSVCLDEFGGEKAVDPSSQETTIIQHI
FGGQLQSQVICSKCNNISNQYENMMDLTVEIHGDASSLEECLVQYTGRESLHGENMYKCD
GCNDYVKAWKRLSVKRAPNVLTIALKRFQSGRFGKINKRVTFPATLDLSPYMSEPGDGTD
IYSLYGVVVHVDMLNASYFGHYICYTKDFHGNWYRIDDCKVMPVNLEEVLSQGAYMLLYS
RDQARSPCLSIPEPPRKEEEMSDASVEAESHPDELVKCSPMESADPTRHYGSEPSDSSLR
AQITNCVEASSAVLEHPDGVTDVSRLISSSSASKGVHIIEEDTVDSQSSPPTSQEISGCV
NVPVTATDLDKVRGDSNGVDVANDKSCRSVYEEALECCEKDRSSADDMEWESSTVVAQDV
EVCKSNGTIDAVAQDIEVCKSNRTIDAAFETTSPVEHPGLMNGNGFHKQIDDG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgccggagtgagcttggatctgaactggttccttcatttgatattcactctg
tttgcgatagcgtttgtgttgcttcacttggtcaagaacacggcctcgaagtactttgag
gtcgacgccaatttcgacggtggtgctgatcggacggtgacggcccaaatgcccggcgtc
cccatcaacgattccgcctgcgccgtctgcggcggtgacggcgtcaagaagtgctctcgc
tgcaaagccttcagatactgctcgcagaagtgccagacagagcattggagatcaggtcat
aagagtgaatgcaatgatatagcagccggtagaatcagcccagctcaaaacgcatcgagt
aatgctagatttaaaactcctgttgcgcgtaaaaatttcaaaggaattgcacttgttcct
actcatggaatcataactaagcgtttcaagcagccaaaaaagattcttttcccctatgat
gaatttgttaaacttttccattgggagaaggctggacttcctccttgtgggctcttaaac
tgcgggaacagttgctttgccaacgttgttctccagtgcctttcgtccactcgaccgctt
gttgcgtacttgttagagaagggccatcggaaagaatgcatacgggatgactggtgcttc
ctctgtgaatttgaaagtcatcttgaaagagcaagccgaagttcacaggccttttcacca
accaacattatctctagactacctaatattggtggaaaccttggctatgggaggcaggag
gatgctcatgaactcatgaggtttgccattgatacaatgcagtcggtgtgtcttgatgag
tttggtggagagaaagctgttgatcctagctctcaagaaacaaccatcattcaacatata
tttggtggccagctacaatctcaggtcatttgttcaaaatgcaataacatatcaaaccaa
tatgagaatatgatggatttaactgttgagattcatggggatgcttcatcattggaggaa
tgcctagtccaatacactggcagggagtcgcttcatggcgaaaatatgtacaaatgtgat
gggtgcaatgactatgtcaaggcttggaagagactttctgttaaacgtgctccaaatgtt
ctgacaattgccttgaaaagatttcagagtgggcgctttgggaaaattaacaagagagtt
acatttcctgcgacactagatctcagtccttacatgagtgaaccgggagatggtacagat
atttatagcctttatggtgttgttgtccatgtggatatgttgaatgcttcgtacttcggt
cattacatctgttataccaaggatttccatggaaactggtacagaattgatgattgcaag
gttatgcctgttaatttggaagaggtgctttctcagggggcatatatgcttttatatagc
agggatcaggcacgatcaccttgtctaagcatccctgaacctccaaggaaggaggaagaa
atgtctgacgccagtgttgaagcagagtctcacccagatgaactagttaaatgttcacct
atggaatctgcagatccaactcgacattatgggtctgaaccatcagacagtagtctgcgc
gcacaaataaccaactgtgtagaagcctcatctgctgtactagagcatcctgatggtgtc
acagatgtgtctcgtctcatatcatcctcatctgcttcaaaaggggttcacataattgaa
gaagatacagttgattcacagtcaagtccacccacttcacaggagatatctggttgcgtg
aacgttcctgtcactgcaacagatcttgataaagtaagaggagattcaaatggtgtggat
gtagcaaatgacaaatcatgtcggtctgtgtatgaggaagcattagaatgctgcgagaag
gatcgctcttctgcagatgatatggagtgggaatcgagtacagtcgtggcacaggacgtt
gaagtttgcaagagcaacgggacaattgatgcagtggcacaggatattgaggtttgcaag
agcaaccggacaattgatgccgcttttgaaacgacctctccagttgaacatccgggctta
atgaatgggaacggatttcataaacagattgacgacggttaa
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