Fragaria vesca (woodland strawberry): 101292002
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Entry
101292002 CDS
T02666
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
101292002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101292002
Membrane trafficking [BR:
fve04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101292002
Protein recycling
Other Rab GTPase associated proteins
101292002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
101292002
NCBI-ProteinID:
XP_004295727
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Position
LG3:12181233..12182066
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AA seq
314 aa
AA seq
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MEKEVIIPFQSSLQHYLRQLVTQYKSKFRPVLIDFRRMRNPASVELIKSIKNFIESFSLN
TSNPQEDAKTVQEFYKNAENSIRSHKLWADQDVDSAMEGLEKYVMTKLFSQTFSSPEDAK
IDREISQKMRLLLTFLKPEHLDISEVLWNEASLYHAIKELQRIKAFKAPRSKLLCVMNSC
KVIYNLLLSSASKSQAPVILGADEFLPVLIYVVIMANPPQLHSNLKFIELYRREAKLVSE
AACCLTHLVSAKTFISELDAKSLSIDEAEFEESMEAARLNDICVHTPLLSGKTCSRCKKP
QNSKFFLKELATLV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaggttattataccatttcaatcttcattacagcattatttacgccagtta
gttactcaatataaatccaaatttaggccagttctcattgattttcgtcgaatgcgaaac
cctgcttctgtggaacttatcaagtccataaaaaacttcattgaatcattctccctaaac
acctcaaaccctcaagaagatgccaaaaccgttcaagagttctacaagaatgcagaaaac
tctatcagaagtcataagctgtgggcagatcaggatgtcgattctgcaatggagggttta
gagaaatatgtcatgacaaaactgttctcccaaacattttcctctccagaggatgcaaag
attgaccgtgaaatttcgcagaaaatgcgcttgttgctgactttcttaaagcctgagcac
ttggatatttcagaagttctatggaatgaagcttcattatatcatgcaataaaggaattg
cagagaatcaaagctttcaaggctcctcgttccaagcttctatgtgttatgaacagttgc
aaggtcatttacaatttattgctgagttctgcatcaaagtcacaagctcctgtaatttta
ggagcagatgaatttcttcctgttcttatatatgttgtgattatggccaatcctcctcag
ttgcattccaacctcaaattcatcgagttatatcggagagaggcaaaacttgtgtctgaa
gcagcctgttgcctcacccatcttgtctcagccaaaacatttatatctgagttggatgct
aaatctctttctatcgatgaagctgaatttgaagagagcatggaagcagcaaggttgaat
gatatttgtgtccacacgccacttttaagtggtaaaacatgttctcgttgcaagaaacct
cagaattcgaagttctttttaaaagaactagctacactagtgtaa
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