Fragaria vesca (woodland strawberry): 101292581
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Entry
101292581 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101292581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101292581
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101292581
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101292581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
Motif
Other DBs
NCBI-GeneID:
101292581
NCBI-ProteinID:
XP_004294959
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Position
LG3:23435510..23439092
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AA seq
308 aa
AA seq
DB search
MSSGGRFCEDVAESHITLADSDAATSFSDLRTSPFRKALPGLNGNAGMPSNKNVHDLLEC
PVCMNLMCPPIHQCPNGHTLCSSCKTRVQNCCPTCRNELGNIRCLALEKVAESLDLPCRY
QIYGCPDIFPYYSKLKHEKVCKYRPYNCPYAGAECSVTGDIQFLMMHLKNDHKVDMHDGS
TFNHRYVKSNPQEVENATWMLTIFNCFGRQFCLHFEAFHIGTAPVYMAFLRFMGDDDEAK
QFTYSLEVGGGGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGNRQELKLKV
AGRIWKEH
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggaggtcgcttctgcgaggatgtggctgagagtcatattacattagccgat
tccgatgcagcgacttcattttctgatctacggacttccccctttagaaaagctcttcct
ggtttaaatggaaatgcaggaatgccatcaaacaagaatgtgcatgacctactcgagtgc
cccgtttgcatgaatttaatgtgtcctccaattcaccagtgtccaaatggccatacttta
tgctcgagctgtaagactagagtgcagaactgttgccccacttgtcgcaatgagcttgga
aatataaggtgcttggcactggagaaagtagcagagtccctggatcttccttgtagatat
caaatttatggctgccctgatatattcccttactacagcaagttgaagcatgagaaagtc
tgtaaatatcgtccttacaactgcccttatgctggagctgaatgttctgttactggagat
atccaattccttatgatgcatcttaaaaatgaccacaaggttgacatgcatgatggatct
actttcaaccatagatatgttaagtccaatccccaagaagttgaaaatgctacgtggatg
ttaactatctttaactgttttggccgtcagttctgcttgcatttcgaagcattccacatt
ggaacagcccctgtatacatggccttccttagattcatgggtgatgacgacgaggccaag
caattcacttacagtctcgaagttggtggcggtggcaggaaactaacatggcaaggaatt
ccgaggagtatccgtgatagtcaccgaaaagttcgtgacagtcaagatggactgatcatt
cagaggaacttagcactcttcttctctggtggtaataggcaggagctgaagctgaaagtg
gccggtcgtatatggaaagaacactga
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