Fragaria vesca (woodland strawberry): 101292749
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Entry
101292749 CDS
T02666
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00061
Fatty acid biosynthesis
fve00071
Fatty acid degradation
fve01100
Metabolic pathways
fve01212
Fatty acid metabolism
fve04146
Peroxisome
Module
fve_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101292749
00071 Fatty acid degradation
101292749
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101292749
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fve01004
]
101292749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101292749
Enzymes [BR:
fve01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101292749
Lipid biosynthesis proteins [BR:
fve01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101292749
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of breast milk
101292749
Exosomal proteins of breast cancer cells
101292749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
101292749
NCBI-ProteinID:
XP_004289548
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All DBs
Position
LG1:complement(20557825..20562119)
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AA seq
661 aa
AA seq
DB search
MKIFSAQVEEGREGQNGKPSVGPVYRNLLSKDNFPPPHPDISTGWDIISQSFQKYPGNRM
LGWRKIVDGKIGPYVWKTYKEVYDELLHVGSALRASGVEPGSRIGIYGSNCPQWIMAMAA
CCAHSLISVPLYDTLGPGAVNYIIDHAEVDVVFVQDKKVKELLNPDCTSTQRLKVIVCFT
SLTDEERGKAAHIGIKPYSWNEFVEMGIQNPLKIFPPLPENISTIMYTSGTSGAPKGVVI
THENMAYGVRGIDLFMEQFEDKMTVDDVYLSFLPLAHILDCVIELYFFHNGASVGYYHGD
LNALGDDILELKPTLLAGVPRVFENIHGGIKKGVQQLNSRRQKIFDILYRYKLAWMNMGF
RNKNASPLADLLAFRKIKSRLGGRIRLIISGGAPLSSEIEEFLRVTCCCFVLQGYGLTET
IGPTTLGFPDEMCMIGAVGTVSVFNELRLEEVPEMGYNPLGDPPCGEICVRGKTVFAGYH
KSPELTSEAIKDGWFHTGDIGHILPNGIIKIIDRKKNLIKLSQGEYVALEYLENVYGISS
IIDDIWVYGNSFKSKLVAVVVPEEESTKKWAYLNGHIGSFSDLCFLDQLKSHVLEELKLT
AERNELRGFEYIKGIIVEPRPFDMERDMVTATLKKKRNQLLKYYQARLDELYQNLDAGRK
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttctcagctcaagttgaggaaggaagggaaggccagaatggcaagccttct
gttggtccggtataccggaatttactgtccaaagacaattttcctccccctcatcctgat
ataagtacaggttgggatatcattagtcaatcttttcagaagtatcctgggaatcgaatg
cttggatggcgtaaaattgttgatggaaagatcggaccttacgtttggaaaacatacaag
gaggtttatgatgaacttcttcatgttggttctgcattacgagcatctggtgtggaacca
ggttccaggattgggatctatgggtcaaattgcccccagtggattatggcaatggcggct
tgttgtgctcatagtttgatctctgtgcctctctatgataccctagggccaggagcagta
aattatatcatagatcatgcagaggttgatgttgtttttgtccaagataagaaagtgaaa
gaactactgaatcctgattgtacatctactcaacgattaaaagttattgtttgcttcact
tcattgacagatgaagagaggggtaaggcagctcacattgggataaaaccatactcatgg
aatgagtttgtggagatgggaattcaaaacccattaaagatttttccacctctgcctgag
aatattagcacaattatgtacacaagtggtaccagtggagctcctaaaggtgttgtgata
acacatgaaaacatggcatatggtgtgagaggcattgacctctttatggaacaatttgaa
gacaagatgacagtggatgatgtgtatctatctttccttcctctggctcatatcctggac
tgtgttatcgagctgtattttttccacaatggtgcttctgttggctactaccatggggat
cttaatgcattgggggatgacatattggagttgaagccaacacttcttgctggggtacct
cgagtcttcgaaaatatacatggaggtatcaagaaaggagtgcaacagctcaattcaagg
aggcagaagatttttgacattctctacagatacaaacttgcctggatgaacatggggttt
agaaacaaaaacgcctcaccacttgctgatctgttagccttcagaaagataaagagtaga
ctgggtggtagaattcgtcttataatatcaggaggtgcacccttaagctctgagattgaa
gaattcttgcgagttacctgctgttgtttcgtactccaaggctatggattgacagaaact
attggtccaacgactcttgggttcccagatgaaatgtgcatgattggtgctgttggtact
gtatcagttttcaacgagctgcgcctcgaagaggtaccagaaatgggctacaacccactt
ggggatcctccttgtggtgagatatgtgtgagaggaaagactgtttttgctggctaccac
aaaagtccggaattgacaagtgaagcaattaaagatggatggttccatacaggggacatt
gggcatatacttccaaatggaatcatcaagatcattgatagaaaaaagaatctgattaaa
ctctcgcaaggagagtatgttgcactcgagtacttggaaaatgtatatggcatttcttct
attattgacgatatctgggtctacgggaatagcttcaagtcgaagcttgttgccgtggtg
gtaccagaagaagaaagcaccaagaagtgggcttatttaaatggtcacattggttcattt
tctgacctttgttttcttgatcagctcaagagccatgttctggaagaactcaagttaact
gctgagaggaacgagctgagaggtttcgagtatataaaaggaatcattgttgagcctcgc
cccttcgacatggaaagagacatggtcactgcaactctgaaaaagaaaagaaatcagttg
ctcaagtattaccaggctagacttgatgagctttaccaaaacctggacgctggacgaaaa
ttttag
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