Fragaria vesca (woodland strawberry): 101292751
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Entry
101292751 CDS
T02666
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101292751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101292751
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101292751
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
101292751
NCBI-ProteinID:
XP_004289651
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Position
LG2:951118..957657
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AA seq
896 aa
AA seq
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MEPAVDIRPGEDATYDGLYSKGHKKLKLSSDRNVCDAMVLSASMHNETVQKKPSSTSAVV
DYTDPLAIPNLLEGLDDGGKYGSVEKDMKALAAQINEVLNPLFAKFPTLSNSYFKEKRRQ
SKLAPELALAIQRAPSLAENNVIDLEDDSVDRNAPAASTAIVIIDSDEEQTEDQRPSYSF
QEVFMTQPSYSFKDIILPQPSEQVFRKDPGVRDQVEETDTNKDPGVYVGVEDEESTEDDD
GLGDAWMEMSMAIESSKDITVDPLSEERTSEGDCEHSFVLKDDLGFVCRICGVIDRSIDT
IFEFQYNKVKRSTRTYMPDSRNGKDRESTEDGGVKLSEDGLIITEISAHPRHMKQMKPHQ
VEGFNFLVSNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPNARPLVVLPKGILDT
WKKEFKYWQVEDIPLFDFYEAKADNRSQQLEVLKKWVKQKSILFLGYKQFSSIVCDRETN
QISTSCQEILLKAPSILIMDEGHTPRNDNTDVFQSIAKLQTPRKVVLSGTIYQNHVKEVF
NILNLVRPKFLRSETSRPIIKRIMSRVHIPGARKQFKAGADNVFYELVEDTLQKDKDFRR
KVTVIHDLREMTSKVLHYYKGDSLDELPGLIDFTVVLNLSDWQKQKIQKEFKKFARKFKQ
SSVGSAVYLHPKLYSVSKDWKPSDSNEKIDELVETIDLNEGIKAKFFMNMLRLCESSGEK
LLVFSQYLPPLKFLERLTVKTKGWSPGRELFVITGESKSENREWSMERFNNSPDAKVFFG
SIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQKRKVFVYRLVAADSPEEED
HSTCFQKELIAKMWFEWNEYCGYRDFEVDTVDVKECGDHFLESPALGEDVKVLYKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggagccggcggtggatatacggcccggtgaagacgccacttacgacggtctgtattcc
aaggggcataagaagttgaaattatcttctgatagaaatgtatgtgatgcaatggtcttg
tctgcaagtatgcacaatgaaactgtacaaaagaaaccaagttccacctctgcagttgtt
gattatactgatccgctggctataccaaacttgctggagggattagatgacggtggtaaa
tatggaagtgttgaaaaggacatgaaggcattggctgctcagataaatgaagtgctgaat
ccgttgttcgcaaaattccccacactatctaattcatactttaaagagaaaagaaggcag
agtaaactggctcctgaattagcgttagcaattcaacgagctccgtctctggcagaaaat
aatgtcattgatctggaggatgactctgttgacagaaatgctccagcagcatcaacggct
attgtaatcattgattcagatgaggaacagactgaagatcagaggccttcctactctttc
caggaggtttttatgacacaaccatcatattctttcaaggatataattctgccacagcca
tctgaacaagttttcaggaaggaccctggagtgagggatcaagttgaagaaactgacacg
aataaagatccaggtgtttatgtgggtgtagaagacgaagaaagtactgaagatgatgat
ggtttaggagacgcatggatggaaatgtcaatggcaattgaatcttcaaaggatatcact
gtagatcctttatctgaagaaagaacgagtgaaggcgactgcgagcattcttttgtctta
aaggatgatcttggatttgtttgccgcatctgtggggtcattgacagaagcattgataca
atctttgagtttcagtataacaaggtcaaaaggagtacaagaacgtacatgcctgattct
cgtaatgggaaagacagagaatcaactgaggatggtggagttaaactttcagaagatggt
ttgattataactgaaatatctgctcacccaagacatatgaagcaaatgaaacctcatcaa
gtggagggtttcaattttcttgttagcaacttagttggtgataatcctggtggttgcatc
ttggcccatgctccaggttctggaaaaacatttatgataattagtttcatgcaaagtttc
ctagcaaagtatccaaatgctagaccgttggttgttcttcctaaaggaatattggataca
tggaaaaaggagtttaaatattggcaagtagaggatattcctttatttgacttctatgag
gccaaagcagacaatcggtcacagcagcttgaggttttgaagaagtgggtgaaacagaaa
agtatcctgttcttagggtacaaacagttctcctctattgtttgtgatcgagaaacgaac
cagatatcaacgtcgtgccaggaaatattgctaaaggcaccttcaattcttattatggat
gaagggcacacccctcggaatgacaatactgatgtattccaatcaattgcaaaattgcag
acaccaaggaaagttgtactttcaggaactatttatcaaaatcatgtgaaggaagtgttc
aacattctgaatctggttcgtcctaagtttttaagatcagaaacttcccgacccatcatc
aagcgcataatgagtagggtacatataccaggtgcaaggaagcagttcaaagctggtgct
gataatgttttttatgaactagtggaggatactctgcagaaggataaggatttcagaagg
aaagtgactgtcatacatgacttgcgtgagatgaccagcaaggtccttcattactacaaa
ggagattccctggatgagcttcctggacttattgatttcactgtggtactcaatctaagt
gactggcagaagcagaaaatccagaaggaattcaagaagtttgcaaggaagttcaagcaa
agttcagttggcagtgctgtttatctgcaccctaaactgtactccgtctctaaggactgg
aaaccctctgattcaaatgaaaagatagatgaattggttgagacgatagacttgaatgaa
ggaatcaaagctaaattctttatgaatatgcttaggttatgtgagtcatctggtgagaaa
ctattggttttcagtcagtacctcccacctttgaaatttttagagagattaaccgtcaaa
acaaagggttggagtcctgggagagagctgtttgtgatcacaggggaatcgaaatctgag
aatagggagtggtccatggagagatttaacaattcccctgatgctaaggtcttctttggc
tcgatcaaggcatgtggagagggtatatctttagtaggggcttcacgagtcttaattttg
gatgtccatcttaatccctctgtaacacggcaagcaattggccgtgcatttagacctggc
caaaagaggaaagtatttgtatatagattggtagctgctgattcccctgaagaggaagat
catagtacttgcttccaaaaagaattaattgccaagatgtggtttgaatggaacgaatat
tgtggttatcgggattttgaagtggatactgttgatgtgaaagagtgtggtgatcatttt
cttgaaagtccggcgttaggggaagatgtgaaggttctgtacaaaaggtag
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