Fragaria vesca (woodland strawberry): 101292816
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Entry
101292816 CDS
T02666
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101292816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101292816
03036 Chromosome and associated proteins [BR:
fve03036
]
101292816
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101292816
Coactivators
SAGA/TFTC/STAGA complex
101292816
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101292816
STAGA complex
101292816
TFTC complex
101292816
SAGA complex
101292816
SLIK complex
101292816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
101292816
NCBI-ProteinID:
XP_004304060
LinkDB
All DBs
Position
LG6:complement(29261326..29266503)
Genome browser
AA seq
542 aa
AA seq
DB search
MSIVPKENIEVISQSIGINNLSPDVALALAPDVEYRLREIMQEAIKCMRHSRRTKLTADD
VDGALNLRNVEPLYGFVSGGPLRFKKAVGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTGL
LCHWLAIEGVQPAIPENAPVEVLTAPSDGKKYEQKDDGLPVELKLPVKHVLSRELQLYFD
KITELVVGRSDDILLKKALLSLATDSGLHPLVPYFTCFIADEVSRGLSDYPLLFALMRVV
HSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGRV
YNTLQSRLTKTLVNAFLDPKRTLTQHYGAIQGLAALGPSVVHLLILPNLESYLRLLEPEL
LLEKQKNEIKRHEAWRVYGALLGAAGQCIYDKLKIFPTLPSPVPQSLWKTNERIVLTTPN
KRKRSVEPMEQQPPSKKIATDGPTGLTNSSPSPMQVDTAAPAPSGDTNKVPSSSSTSLSN
ESISNSRGRSNGADAQSLKKSAVLNQVWKDELNSGKLLVSLFQLFGEDILPFIPAPEMSL
FL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtgcccaaagagaacattgaagtaatctcacagagcattgggatcaacaat
ttgtctccagatgtcgctcttgctctcgcccctgacgtcgagtatcgcctccgtgagatc
atgcaggaggctatcaaatgtatgcgtcactcacggagaactaaattgacagctgatgat
gtcgacggtgcgctcaatttgagaaatgtcgagccactatatggttttgtgtctggaggc
cccttgcgtttcaaaaaagctgttggacatagggatttgttttacatcgatgacaaggat
gtcgattttaaagatgttatcgaagctcctttaccaaaagcaccacttgatactggactt
ctttgtcactggctagctatagaaggtgtacaacctgcgattccggaaaatgcacctgta
gaagtacttacagctccttctgatggcaaaaagtatgagcaaaaggatgatggacttcct
gttgagctcaaattaccagttaagcatgtattatctagagagcttcagctatattttgac
aaaatcactgagcttgtcgtgggtaggtccgacgatattcttcttaaaaaagcactattg
agcttggctactgattcgggacttcatccattagttccttatttcacatgctttatagct
gatgaggtttctcgtggtttgagtgattatccacttctttttgctctgatgcgagttgtc
catagccttctccagaatcctcacattcacattgaaccttatctacaccaattgatgcca
tctgtagttacttgccttgtggcaaaaagattgggcaataggtttgctgacaaccattgg
gaacttagagacttcacagcgaatctggttgcttcaatttgtaaaaggtttggtcgtgtc
tataacactctccagtcacgacttacaaaaactttggtcaatgcatttttggacccaaaa
cggaccttgactcaacactatggtgcaattcaaggtttagctgctctagggcccagtgtg
gtccaccttttgatattgccaaatctggagtcatatctgcgacttcttgaaccagagctg
cttcttgagaagcaaaaaaatgagatcaagaggcatgaagcttggcgtgtttatggagcg
ttgttgggtgcagcagggcaatgtatatatgataagctgaagatcttcccaacgttgcca
tctcctgtaccacaatctctctggaagaccaatgaaagaattgttctcactacgccaaat
aaacggaagagaagtgtggagcccatggaacagcaaccaccctcgaagaaaattgcaact
gatggcccaactggtttaactaattcttcaccatctccaatgcaagtagacacagcagct
ccagctccttcaggtgataccaataaagtcccctcatcatcatctacgagtttgtctaat
gagagcatttcaaacagcagaggtagaagtaacggggctgatgctcagtctttaaagaag
tcagctgtcctcaatcaggtctggaaggatgaattgaattctgggaagttactggtatcg
ttgtttcagttgtttggtgaagacattctccccttcattccagctccagagatgtctttg
tttctgtaa
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