Fragaria vesca (woodland strawberry): 101292840
Help
Entry
101292840 CDS
T02666
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101292840
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101292840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
101292840
NCBI-ProteinID:
XP_004288494
LinkDB
All DBs
Position
LG1:19540554..19545717
Genome browser
AA seq
686 aa
AA seq
DB search
MEKMRQWGWLLGSFAAMLLLVLFLARDGSYDETTNPVRRSLRSIIPWQQHGVSLTAKNRN
RVVLDNGIVKLIFSNPEGNVIGIQYKGLDILEMGNEEDNRGYWDLVWKKNTTDKLQATKF
KVITARPDQAEISFLRTYDVSLGNGTNIIPLTVDKRYILRRGASGFYAYGIFERLEGWPG
VQDMDQIRMVFKLEQAKFDYMALSDTRQRMMPTAADRGNGEQLAYKEAVLLTDPSNPEFR
GEVDDKYQYSIEDKDNKVHGWISTDESVGFWMITPSDEFRTGGPFKQDLTSHVGPTTLSM
FVSTHYAGKDLGIKFEEGEAWKKVFGPVFVYLNSAPSSKNSTSILWNNAKQQLFKEVEIW
PYNFTQSEDFPSSDQRGSVSGQLQIHDRYINESLLPASSGYVGLAAPGEVGSWQRENKGY
QFWNQADEEGRFILKDVRPGNYSLYAWVPGVVGDYKYEADITIIPGCNIKLDNLTFEPPR
TGPTLWEIGIPDRTAAEFYVPDPYPTLLNNLYNHIPSENFRQYGLWARYGERYPHSDLVY
TVGVNNYTDHWFYAQVTKITGDETYVGTTWEVVFELHNVTNPGIYTLQLALASAHSAELQ
VRINSQSDERPLFSTKLIGGDNAIARHGIHGLYWLFSVEIPSSLLKEGNNSVYLSQTRGG
ETFQGVMYDYIRLEAPSSHTDSQVVI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgaggcaatggggttggcttctggggtcatttgcagcaatgcttcttctg
gttttgttcttggctcgtgatggaagttacgacgagacgacaaacccagtaagacgatca
ctgagaagcataattccttggcaacaacatggtgtcagtttaacagcaaagaaccgcaat
agagttgttttggataatggcattgtcaaactcattttctctaatccggagggaaacgtt
attggaatacaatacaaaggccttgacatacttgaaatggggaatgaagaagataataga
gggtactgggatttggtctggaaaaagaatacaactgacaaactacaagcaacaaaattt
aaggtgattaccgcgaggccagaccaagcagaaatttctttcctaagaacatatgatgtt
tcccttggtaacggcacgaacataattcccttgaccgtagacaaaaggtacatattgcgg
aggggtgcttctggtttctatgcatatggaatattcgaacgccttgaagggtggccggga
gttcaggatatggatcaaattagaatggttttcaagcttgaacaagccaaatttgattat
atggcgttatcagacactaggcaaagaatgatgccaacagcagcggaccgtggtaatggt
gagcaacttgcgtataaggaagctgttcttttgacagatccaagcaatcctgagtttaga
ggagaggtagatgacaagtaccagtactcaatcgaggacaaagataacaaagttcatggt
tggattagtactgatgaatctgtgggattctggatgatcacacccagtgatgaatttcga
acaggaggcccctttaagcaggacctcacctcccatgttggcccaactaccctctcgatg
tttgttagtactcattacgctgggaaggatcttgggatcaaattcgaagaaggtgaggca
tggaaaaaggtttttggacccgtctttgtgtatcttaactcggctccaagctcaaagaat
tctaccagtatactttggaataatgctaaacagcagctgtttaaagaagtcgagatctgg
ccgtataatttcactcaatccgaggactttccttcttctgatcaaaggggatcggtttcc
ggccagttacaaatacatgatcggtacatcaatgagagccttctcccagcaagttctggc
tatgtaggattggctgcaccaggagaagtgggatcatggcaaagggaaaacaaaggttat
caattttggaatcaagccgacgaagaaggtagattcattctcaaagatgttcgacccgga
aactatagtctgtatgcatgggttcctggcgttgttggggattacaaatatgaggctgat
attacaattattccagggtgtaatatcaaactggacaatcttactttcgaacctccaaga
actggtcctacattgtgggaaattggcatccctgatcgaactgctgccgaattctacgta
ccagatccttatccgactcttttgaacaatctatacaaccacataccctcagaaaacttc
aggcagtacgggttgtgggcacgttatggagagcgataccctcatagtgatcttgtctac
actgtaggtgtcaacaattacactgatcactggttctatgctcaagtgaccaagattact
ggagatgaaacatatgtaggaacaacgtgggaagttgtatttgaacttcataatgtcacg
aatccaggaatatatacactccagttggcattggcctcggcacatagtgcagaattgcag
gttcggattaacagccagagcgacgagagacctcttttctcaacaaagttaatcggaggg
gacaatgcgatagcaagacatggaatccatggtctgtactggttgtttagtgttgagata
ccgagctcgctactaaaggaaggaaacaacagcgtgtacctttctcagacgagaggtggt
gaaactttccaaggagtcatgtacgactatatcagacttgaagcaccttcatcacacact
gactcacaagtagtgatatag
DBGET
integrated database retrieval system
