Fragaria vesca (woodland strawberry): 101292920
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Entry
101292920 CDS
T02666
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101292920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101292920
03036 Chromosome and associated proteins [BR:
fve03036
]
101292920
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
101292920
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
101292920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
WDR54
CFAP43_N
Beta-prop_VPS8
RMC1_N
Motif
Other DBs
NCBI-GeneID:
101292920
NCBI-ProteinID:
XP_004305559
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Position
LG6:complement(19578091..19580668)
Genome browser
AA seq
436 aa
AA seq
DB search
MDSSRKAMSQYPRHRSQENLDRFIPNREAIDIGYANAVLTERRTGKVNPVESSASTVAYQ
KLLAETLNMNRRILTFKSKPPAPIELIPRAMCSPPNNKAKSRTRRHISQTAEKILDAPDL
SDDFYLKLLDWGTNNILAIALGSTVYLWDASNSSTSELVTVSDDDGPVTSLSWAADGRHI
ALGLNNSCVELWDSISVKLLRRLRGHHERVGSLAWNKEILTTGSRDGNIINNDVRVRSHM
VQNFLGHQQEVCGLKWSASGCQLASGGNDSLVFIWDRSFASRNAQWLHRLQDHTSAVKAL
AWCPFQANLLASGGGVGDDTIKFWNAHTGSCLNSVNTGSQVCALLWNSHERELLSSQGFT
ENQLILWKYPSMVRLTELSGHTSRVLYMTQSPDGCTVASAADETLGFWNVFGIPEVAKPA
PKQSLMPFSPRYNCIR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcaagaaaggccatgtcccagtacccaagacatcgtagtcaagaaaatttg
gataggttcatccccaatcgggaggctatagacattggttatgccaatgctgtgctgaca
gaaaggagaacaggcaaagtgaacccagttgagagctctgcatcgactgtggcgtaccag
aagctattggctgagacgctcaacatgaatcggagaattcttacattcaagagcaagcct
cctgcgcctattgaactgattccgagggcaatgtgttcacccccaaataataaggccaaa
tccaggaccaggagacacatttctcagacagcagagaagatattggatgctcccgatctc
tctgatgatttctatttgaagttactggactggggcacaaacaacatccttgcaatagct
cttggaagcacggtttacctatgggatgcttcaaacagctccacctcagagcttgttaca
gtttctgatgatgatggtcctgttacaagccttagctgggctgctgatggaaggcacatt
gctcttggattaaacaattcttgcgttgaattgtgggattctatctctgttaaactgtta
cgaagattgaggggtcaccatgaacgagtaggttcattggcatggaacaaagagattctc
acaacaggttcaagggatggaaatatcatcaacaatgatgtaagagttagatcccatatg
gttcaaaacttcttgggccaccagcaggaggtttgtggactaaaatggtctgcctctggc
tgtcagctagcaagtggaggtaacgatagtctggttttcatatgggataggtcatttgcc
tctcgaaatgcacagtggcttcacaggttacaagatcacacttcagcagtcaaagccctt
gcttggtgtccattccaagcgaatttactagcctctggtggtggtgtaggggatgataca
attaagttctggaatgcacacacgggctcctgcttaaattcagtcaacacaggctcgcaa
gtgtgtgctctactgtggaacagccatgaacgagagttgttaagctctcagggctttaca
gagaaccaactcatcctctggaagtacccgtccatggtgaggttgacagagctcagtggt
cacacttctagagtgctctatatgacgcagagcccagatgggtgcaccgttgcatctgca
gcggacgaaacactggggttctggaatgtgtttgggatcccagaagttgccaagcctgct
ccaaaacaaagtctgatgccattttctcccaggtacaactgcattcgttga
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