Fragaria vesca (woodland strawberry): 101292936
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Entry
101292936 CDS
T02666
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101292936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101292936
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101292936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
HNH_3
Motif
Other DBs
NCBI-GeneID:
101292936
NCBI-ProteinID:
XP_004288788
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All DBs
Position
LG1:complement(2919934..2921342)
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AA seq
288 aa
AA seq
DB search
MDAKQDRKIFVGGITREVDEDILEEHFSRYGIVEECVIVLDKITRQPREFGFVTFVEASV
AKSVLEESHSICGEKIDVRPSEPKRQRKQFNQEGQHVQQINQKEHHDQHQGYIPRKIFVG
GLPRDLTEDEFKDYFAEFGAIEDGVIIHFKDSNTPKGFGFITFKSDDSVVDVLHKQENKF
HELKDKQVEVMRARPEVKRNRHGLWRWLPRDDLAFGLDQFICYNCGGAYGYGHHQGCMYW
PNPFIGVWNIIRVIPTNWIGGELVDQSAWDGYDSQLTHVTHSRVAELA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaagcaagataggaagatattcgtgggtgggataacgagggaggttgatgaa
gatatcttggaggaacactttagcagatatgggattgtagaagagtgtgtgatcgtcctg
gataagatcactcgtcaacctagagagtttggttttgttaccttcgttgaagcgtctgtg
gctaagagtgtgttagaagaaagtcactcaatctgtggtgaaaagatcgatgtaagaccg
tcggaaccaaaacgccagagaaaacaatttaatcaagaagggcaacatgttcaacaaatc
aatcaaaaagagcaccatgatcaacatcaaggttacatccctagaaagatttttgtaggg
ggtttacctcgtgatctaaccgaagatgaattcaaagactattttgctgagtttggtgca
attgaggatggagtcataatacatttcaaggacagcaacacaccgaaaggtttcggattc
attacttttaaatcagatgattctgttgtggatgtcttgcataaacaggagaacaagttt
catgaactgaaagataagcaggtggaggtaatgagggctcgtcccgaagttaaaaggaac
aggcatggattgtggagatggcttcctcgcgacgatcttgctttcgggcttgatcagttt
atttgctataattgtggaggtgcttatggttatggacaccatcaagggtgcatgtattgg
ccaaatccttttattggagtgtggaatatcattagggttattcccaccaattggattggt
ggtgaattagttgatcaaagtgcttgggatggttatgattctcaacttactcatgtaact
cattcaagagttgctgaacttgcataa
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