Fragaria vesca (woodland strawberry): 101292946
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Entry
101292946 CDS
T02666
Name
(RefSeq) uncharacterized LOC101292946
KO
K19022
AP-5 complex subunit beta-1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101292946
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
101292946
BRITE hierarchy
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
101292946
NCBI-ProteinID:
XP_011469645
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Position
LG7:14963361..14967521
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AA seq
1115 aa
AA seq
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MTDKPPEPILSPPSKPVTLQDWESVIDDFQHGGARRHRWTSAHPILIDQALSCLNKREFP
LKLQLIVFLEEFSDPLFTSDPDSLPKNLHRLIETLRALIQTPADGVHVTLALKEQTMLSV
TAIVIAADYMLDGLVELLLTVVNRPNHGVDRQARALACECLRELEKSYPCLLSDIGGHLW
SLCQSERTHAAQSYILLFTTVVHNIVAKRLGVSILNTKVPLVPFSAPQVLVNGSAKEGSG
GLNYKELRRAMSFLLEWPQVLTPCGMVEFLDLIMPVAMALELQASMLKVQFFGMIYSSDP
LLCHVVLTMYRPFLDAFDGQEGQIASRLMLLSRETQQHLVFRLLGLHWLLGFGELVLRRE
VRKVKGIVEMGLRFYPSVFDPLALKALKLDLLAFCSVCVDVLKLEGVSGEGKGNDKLVVK
VFKDALVSVSAFKWLPPHSTETAVAFRTLHRFLIGASSHLDNDPSPTRSLMDSTTFTSIQ
GMLVDLMLEYRRLVPVIVALTDRLFGCQKHCWLGERLLQSFDQHLLPKVKLDYTLVSCFP
VFDKIAESDTIPPQGLLELLTKFMAFLVVKHGPYTGLRSWSQGSRVLGICRTFLMHHHTS
RLFLRLSRLFAFTCLYFPDLEVRDNARIYLRLLICVPGKKLRDMLNLGEELGISPSALPS
FNIQSPLSADNLKKSKGISSYVHLERVIPLLVQQSWSLSLSSFGFGNHETGYPEGIRDSE
PIIEESEIDSSSNIQVTAQTIDRPHEPLRVMDAKISEILVTLRRHFSCIPDYRHMPGFKV
RISCSLRFESETLSRIWGLDSPTDVLDELDALPALYATVLNFSSSAPYGSIASFHIAFLL
GEPSRKIDISDQAAALAIVPLENVSREEESFRAPVMIELEPREPTPGLIDVSIETNAESG
HIIRGQLHGITIGIEDMFLRAVIPPDVPEVASPGYYLDLFNALWEACGNSNTGRETFPLK
GGKGVAAIAGTRSVKLLEVPASSVIQATERHLAPFVVSVTGEPLVNAVKDGGIIRDIIWR
DDASDSSLDIAGSGTDFDRGPLHLTYTDDIDERDSTVNNRKKNMGCFHILIFLPPRFHLL
FEMEVCDDSTLVRIRTDHWPCLAYTDDYLEALFLA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagccaccagagccgatcctatcgccgccgtcgaaacccgtcacgctccaa
gactgggaatctgtaatcgatgatttccagcacggcggcgcacgccgccaccgctggacc
tccgcgcacccaatcctgatcgaccaagccctctcctgtctcaacaagcgcgaattccct
ctcaagctccagctcatcgtcttcctcgaggagttttccgacccgctcttcacatccgac
ccggattccctccccaaaaacctccaccgcctcatcgaaaccctccgcgccctgatccag
acccctgccgatggcgtccacgtcaccctggctctcaaggagcagacgatgctctccgtc
accgcgatcgtcatcgccgcggactacatgctcgacggcctcgtggagctgctcctgacg
gtggtgaaccgccccaaccacggcgtcgaccgccaggcgcgtgcgctcgcgtgcgagtgc
ttgcgcgagttggagaagtcgtatccttgcttgctctccgatatcggcgggcatctttgg
agtctgtgccagagcgagaggactcacgccgcgcagagctacattctcttgtttacgacc
gtcgttcataacatcgttgctaaaaggctcggcgtttcgattctgaatacgaaggtgcct
ttggtgccgtttagtgctcctcaggtgttggtgaacggctccgcgaaagaaggctccggc
gggttgaactacaaggagctgaggagagcgatgtcgtttttgctggagtggccacaggtt
ttgacgccgtgtgggatggttgagttcttggatttgataatgccggtggccatggcattg
gagctgcaggcttcgatgctgaaggttcagtttttcgggatgatttattcgtctgatccg
ttgctttgtcatgttgtgttgacaatgtaccggccgtttttggatgcgtttgatgggcag
gaggggcagattgcgagccggcttatgctgctttcgagggaaacacagcagcatttggtg
tttaggttgctggggctgcattggttgttggggtttggtgagttggtgttgagaagagaa
gtgaggaaagtgaagggcattgttgagatggggttgagattttatccgagtgtgtttgat
ccgctggctttgaaagcgttgaagcttgacctgcttgcgttttgctctgtttgtgttgat
gtgttgaaattagagggtgtttcgggggaggggaagggtaatgataagttggtggtgaag
gtgtttaaagatgcacttgtttctgtatctgcctttaaatggttacctccacacagcacg
gaaactgcagtagcatttcgaaccttgcataggttcttgattggggcatcatctcattta
gacaatgatccttcgcctactagaagtctcatggactccaccactttcacttccatacag
gggatgctggtggacctgatgttagagtatcggagattggttccagtgattgttgctttg
actgatcgcttgtttggttgtcaaaagcactgttggttaggagagcgtttgctgcagagt
tttgatcagcatttgcttccaaaagtcaaattggattatactttggtttcttgcttccca
gtatttgataagattgctgaatctgatacaattcctcctcaaggattgctagagctgctt
accaagttcatggccttccttgttgtaaaacatggcccatatacaggactaaggtcatgg
tctcagggaagcagagttcttggcatctgtagaacttttctgatgcatcaccacacctct
agattgttcctcagattatctcgtctttttgcattcacttgcctttactttcctgattta
gaggttcgcgacaatgcaaggatctaccttcggttgctgatctgtgtaccaggaaaaaag
ctcagggacatgctgaatcttggggaagaactcggtatttcaccatctgctctaccaagt
tttaatatccagtctccactgtctgctgacaatcttaagaagtccaagggcatctcctcg
tacgtccaccttgagcgcgtgattcccctacttgtccaacagtcttggtccttgtcactg
tcatcatttggttttgggaatcatgaaactggttacccagaaggcatcagagacagtgaa
cccataatagaggagagtgaaatcgatagcagtagtaatatccaggttaccgcacagaca
attgatagaccacatgaaccactgcgtgtcatggatgcaaagatttcagagatattagta
acgttaaggaggcatttctcatgcattcctgattacagacatatgccaggatttaaggtt
agaatatcatgtagtttgaggtttgaatctgagactttgagtcgtatatggggacttgat
tcccctactgatgtgctggatgagttggatgcccttcctgctttatacgcgactgtgcta
aacttttcgtcatctgctccatatggttctattgcatcatttcatatagcttttcttctt
ggtgaacctagcagaaaaattgatatatcagatcaagcagccgctttagctattgttcct
ttagaaaatgtttctcgagaagaggaaagcttcagagctccagtaatgatagaactggaa
ccacgggaacctactcctggtctgattgatgtttccattgaaacaaatgcagaaagtggt
catataatccgtggtcagcttcacggtatcactatagggatagaggatatgtttctgagg
gcagttattccacctgacgtcccagaagttgcctcacctggttattacttggacttgttc
aatgctctttgggaggcatgtggtaattctaacactgggcgggagaccttcccattgaaa
ggagggaaaggggtcgcagctatcgctggaacccggtcagtcaagctgcttgaagttcct
gcatcttctgtgatccaggcaactgagcgccacttggcaccctttgttgtaagtgtgact
ggggaaccacttgttaatgctgttaaagacggaggaatcattagggatatcatatggagg
gatgacgcctctgattcttccttagatatcgctggctccggtactgatttcgatagaggt
cctcttcatcttacatacactgatgatatagacgaaagggacagtactgtcaataaccgt
aagaaaaacatgggctgcttccacattttgatatttttacctccaaggttccatctcctc
ttcgaaatggaagtatgtgatgattcaacattggtccgaatccgaactgatcactggcca
tgcctagcttatactgatgattatttggaagctttgtttttggcatag
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