Fragaria vesca (woodland strawberry): 101292999
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Entry
101292999 CDS
T02666
Name
(RefSeq) homeobox-leucine zipper protein HDG11
KO
K09338
homeobox-leucine zipper protein
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101292999
Transcription factors [BR:
fve03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
101292999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101292999
NCBI-ProteinID:
XP_004299483
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All DBs
Position
LG5:complement(9597994..9601328)
Genome browser
AA seq
709 aa
AA seq
DB search
MEFGGGSGGDHDGSDSHRRKKRYHRHTSNQIQRLEAMFKDCPHPDEKQRLQLSRELGLAP
RQIKFWFQNRRTQMKAQHERADNSVLRSENDKIRCENIAIREALKNVICPSCGVPPINED
NYFDEHKLRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASFGGHGM
GGPSLDLDLLPGSTSSTMPSLPYQPIGISDMDKSLMTDIAANAMEELLRLLQTNDPLWMK
SSTDGKDVLNLESYDRIFPRATTHLKNPNLRIEASRASGVVIMNGLALVDMIMDPNKFGE
LFPTIVSMARTIEVISSGMLGSHSGTLQLMYKELQLLSPLVPTREFYFLRYCHQIEQGHW
AIVDVSYDFPRDNQFANQSRSHRLPSGCLIQDMPNGYSKVTWVEHVEIEEKAPIHRLYRD
LIHSGQAFGAERWLVALQRMCERYACLMVSGTSTRDLEGVIPSPEGKRSMMKLAQRMVNN
FCASISTSNGHRWTTISGMNEVGVRVTIHKSTDPGQPNGVVLSAATTIWLPLSPQTVFNF
FKDERTRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCIDSSG
SLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTITPDGRQDQGDTSASTSSCSNINHIGG
SGSLITVAFQILVSSLPSAKLNMESVNTVNNLIGTTVQQIKSALNCSSS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggcggtggctccggtggagaccacgatggctcagactctcatagaaggaag
aagcgctaccatcgtcacacttctaaccagattcagaggcttgaagcgatgttcaaagac
tgccctcacccggatgaaaagcaaaggttgcagttgagcagagaactgggcttggctcct
cgccagatcaaattttggttccaaaaccggagaacccagatgaaggcccaacatgaaaga
gctgataactctgtgcttcgatcagagaacgacaagatccgatgtgagaacattgccatc
cgagaggcactcaaaaatgtgatttgcccatcttgtggtgtccctcccattaatgaagat
aattattttgatgaacacaaattgagaatggagaacgctcagttgaaagaagagctagat
agagtatctagtattgctgccaagtacatagggaggcccatttctcagctcccaccagtt
cagcctattcatatatcttctctggatttatcaatggcaagttttggggggcatggcatg
ggtggtccttctcttgatcttgatcttcttccggggagtacttcatctacaatgcctagt
ttgccttaccagccgattggcatttcggacatggacaagtccctcatgacagatattgct
gcaaatgcaatggaagagttgcttaggcttttgcagactaatgatccactatggatgaag
tcatccaccgatggcaaggatgttcttaatcttgaaagctatgataggattttccccagg
gctactactcatttgaaaaatcccaatcttagaattgaagcatctagagcttctggtgtg
gtaatcatgaatggcttagcattagtcgacatgattatggacccgaacaaatttggggaa
ctatttccgacaattgtatcaatggctagaacaattgaagtgatatcgtctggaatgtta
ggtagtcacagtggcactctgcagctgatgtacaaagagttgcagctgctttctccatta
gtaccaactcgagagttctacttccttcgttattgtcatcaaattgagcaaggccattgg
gcaattgttgatgtttcttatgattttccacgagataaccagtttgcaaatcaatctcga
tctcataggcttccttctggatgcttgattcaagacatgcctaatggatattccaaggtt
acttgggtggaacatgttgaaatagaagagaaagccccaattcatcgactttatagagat
ctaattcacagtggacaagcatttggagctgaacgttggcttgttgctcttcagagaatg
tgcgaaagatatgcatgcctaatggtttcaggcacttctactagagatcttgaaggagtg
atcccgtcacctgaaggcaagagaagcatgatgaaacttgcccaaaggatggtcaacaac
ttctgtgcaagcattagcacatctaatggccatcggtggaccacaatttctggtatgaac
gaggttggagtgcgagtaaccatccataagagcacggatcctggtcaacccaatggtgtg
gttcttagtgcagctactaccatttggctcccactatctccacaaactgtcttcaatttc
ttcaaggatgaaagaactcgacctcagtgggatgtcctttccaatggcaatgcagtgcaa
gaagttgcccatatagcaaatggttctcatccagggaactgcatatctgttcttcgagcc
ttcaacactagccagaacaacatgttgatactccaggagagttgcatagactcatcaggg
tctctagttgtgtactgccccgttgatcttccagccatcaacatcgcaatgagcggcgag
gatccttcatacattcctctgctgccatcaggattcaccattacacctgatgggcggcaa
gaccaaggggacacatctgcatcgacaagtagttgttctaacataaaccacataggaggc
agtggctcactgattacagtggcatttcaaattcttgtgagcagcttgccctcggcaaag
ttgaacatggagtcggtgaatacagtgaacaaccttattggcaccaccgtgcagcaaata
aagtctgccttgaattgtagtagttcctga
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