Fragaria vesca (woodland strawberry): 101293006
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Entry
101293006 CDS
T02666
Name
(RefSeq) uncharacterized LOC101293006
KO
K04706
E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101293006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101293006
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fve04812
]
101293006
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
101293006
Cytoskeleton proteins [BR:
fve04812
]
Eukaryotic cytoskeleton proteins
Septins
Septin associated proteins
101293006
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MIZ
zf-Nse
Motif
Other DBs
NCBI-GeneID:
101293006
NCBI-ProteinID:
XP_004300819
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Position
LG5:complement(1882517..1889167)
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AA seq
884 aa
AA seq
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MTGTTLTPQSASNLVSLNIGGGAGPQLSASFVNSFRVTAVAERLLNHVQSGFRGDVMEFF
NLCLSLARGIDYAVANNEVPAKASDLPSLLRQICQRKNNDVLVAAVMVLMISVKNACRTG
WFSEKESEELFSLANEIGSRFCGSGDITTGSDCSLSIVDKVIERYYPTLKMGQTLASLEV
KPGYGTYVLDFHISKSTGYASHEKIRLFVAQTDNIETSSCIISPQQVNFLLNGKGVDKRI
TSTMDTGPQLPTNVTGMLKYGTNLLQAVGQFNGHYIIVIAFMSIASSIDPPVLKDYVQPI
EPSSKSDTDIVEGPSRISLNCPISFTRIQTPVKGHLCKHLQCFDFRNYITMNIRRPRWRC
PHCDQYVCYLDIRVDQNIVKVLREVGENVSKVNISVDGSWKVSENDDDDLYLVDKLNETS
EMDEATPGPSVMDLTNDDDTEMASACEPEDVKPLSNTNTAQVENDFWSGVYLANCTSYSG
PSSLQPSLLSDAVSLALNREAGSHGNTDFLVSAMHNQLSTPNYVNSQLLQSANSTASNEY
GTSQTLPRELASGLPIGRTPTAVQALPALSQTLGVQQRPRTSFNNPAPNSASLTSHAGQS
ITSEANVLSGICSDLERQQYFARPQMNPVQVSGIASSSLQHGSRTTQNCAPQDRSFTHGQ
SVVGHQVPSQLQSASRVSSGLQGFTNAHLDKTFNSRTPPAMSQSPRVHTLRSHVRQGSAQ
VGINQAPSSLNNQQSFTVAAQRAAMARQSSPMPAQNQTPRTRPSLSVNAGGFRGSAGDRR
GNIGGPVQAVSGADELVDSPSEQNWRPTGRMRGSLSGQAYTAALNKFIIRPTPPTEKARP
ASHLTPPSHLTRPPHLTSPPAVVPSQLPTDMSSQLPQMPTSQPL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgacgctcacaccgcagtcggcgagtaacttagtcagtctcaacattggc
ggcggcgccgggccacagctctcggcttcgttcgtgaactccttccgagtcaccgccgtc
gccgagcggctcctcaaccacgttcagtctggttttcgcggtgacgtcatggagttcttc
aacctctgcctttctctcgccagagggattgattatgctgttgcgaacaatgaggttccg
gcgaaggcgagcgatttgcctagtctgttgagacagatatgccaaaggaaaaacaacgac
gttttggtagctgctgttatggtgctgatgatatctgtgaagaatgcttgtaggactgga
tggttttcggagaaggagagtgaagagctgttttctctagcgaatgagattgggagtagg
ttctgtggctcgggggatatcacaactggatctgactgttctctatctattgttgacaaa
gttatagaaagatattatccaacgttgaagatgggtcagactcttgcctctctcgaagtt
aagcctggatatggaacatacgtgcttgatttccatatttcaaagagtacaggttatgct
tcccatgaaaaaattcggctatttgtagcccaaactgataatatcgagacatcttcttgt
attataagtccccaacaagtgaactttcttctgaatggaaagggagtagataagaggatc
acttctacaatggatactggaccacagttgcctacaaatgtgactggaatgcttaaatat
ggaacaaatcttcttcaagctgtgggccagttcaatggtcactatatcatagtgattgcc
ttcatgagcatcgcatcatcaattgaccctccagtactgaaagattatgttcagcccatt
gaaccttcctcaaagtcagatactgatatagttgaagggccatcaagaatatcacttaat
tgtcccataagctttacgcgaatccaaactcctgttaaaggacatttgtgcaaacatctt
cagtgcttcgacttcaggaactacatcactatgaacataagacgaccaaggtggcgctgc
ccccattgtgatcagtatgtttgctatttggacattcgtgtcgatcaaaatatagttaag
gtcctgagagaggtaggagagaatgtttctaaagtaaatatctctgtagatggatcatgg
aaggtgtcggaaaatgatgatgatgatctatatctggtagacaaactaaacgaaacatct
gagatggatgaagctactcctggtcctagtgttatggatcttaccaatgatgatgatact
gagatggctagtgcttgcgaacctgaagatgtgaaacctttgagcaatacaaacactgct
caagtagaaaatgacttttggtctggagtttacttggctaattgtacgtcttactctggt
cccagttctttacaaccttccttgttgtctgatgctgtttcacttgctcttaatcgagaa
gccgggagtcatgggaacactgattttttggtgtctgcaatgcataatcaactctctact
cccaattacgtgaactcacagttgttgcaatctgcaaattcgactgctagcaatgagtat
gggacatcacagacattacctagagaactggcttccgggctgccaataggcaggactccg
acagcagttcaggccctaccagctttgtcccagacacttggtgtgcaacaaagacccaga
accagtttcaataatccagctcccaatagtgcctccctcacttctcatgctggccagtct
atcacttccgaggcaaatgttctcagtggaatctgtagcgacttggaaaggcaacaatac
tttgctaggccccaaatgaatccagttcaagtgtcaggcattgcttcatcctcattgcag
catggctcaagaacaactcagaattgtgccccccaagatcggtcctttactcatggccaa
tccgttgttggacatcaggttccgagccaactgcaaagcgctagcagagtatcttctggg
ctccaggggttcacaaatgcacacctagataaaacatttaattcgaggactccaccagct
atgagccaatctccaagggtacatactttacggtcccatgtaaggcaggggagtgcacaa
gttggaattaatcaagcaccaagttctttaaacaaccaacagagcttcacagtggctgct
cagcgagctgctatggccaggcagtcttcaccaatgccagctcaaaatcaaactcccaga
accaggccatctttgtctgtaaatgctggagggtttagagggtcggcaggggatcgacgt
ggaaacattggaggtcctgtccaagcagtttcaggggctgatgagttggtggattcacca
tctgaacagaattggcgaccaacaggtcgaatgcgtggaagtctctctggtcaggcttat
actgctgctttgaacaagttcataattcggccaaccccaccaactgaaaaagcgagacct
gcgtcacacctgacccctccttcacacctgacccgtcctccacacctgacctctccacca
gctgttgttccatcccaattgccaactgatatgagctctcagcttcctcaaatgcctact
agtcagcctctctga
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