Fragaria vesca (woodland strawberry): 101293028
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Entry
101293028 CDS
T02666
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101293028
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101293028
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101293028
NCBI-ProteinID:
XP_004304844
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Position
LG6:complement(2479488..2481059)
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AA seq
394 aa
AA seq
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MENPRTTIIFLSLLVFFINSAVSSTAVMTYNVADLGAKPDGQTDSTKAFLSAWDKACDSV
DPSVIYVPTGRFLLRNAVFAGPCKNMAITFRIAGTLVAPSDYRVIGNAGNWLFFRHVNGV
TISGGILDGQGTGLWDCKASGKGCPSGATTLGFSNSNNIVVSGVTSLNSQMFHIVINGCN
NVKLQGVRVSASSNSPNTDGIHVGKSSGVIILDSKIATGDDCVSIGPGTTNLWIENVACG
PGHGISIGSLGKDQEEEGVQNVTVKTVTFTGTQNGLRIKSWGRLSTGFAKNILFQHAFMV
NVRNPIVIDQNYCPGEIGCPGQDSGVQISDVTYQDIHGTSATEVAVKFDCSSKFPCSKIT
LDDVKLSYKNEAAEASCSHAGGTALGTVQPTSCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcccagaactactatcatttttctctcacttcttgttttcttcataaactca
gccgtatcatcaactgcagtcatgacttacaatgtggccgatttaggagccaaaccagac
ggccagaccgactcaaccaaagccttcctttctgcatgggacaaagcctgtgactccgtc
gatccgtctgtcatctatgtcccgacgggaaggttcttgcttcgtaatgcggttttcgcc
ggaccatgcaagaacatggccatcacttttcgcattgccggcacactcgtggccccttca
gattaccgggtcataggaaatgccggcaactggcttttctttaggcatgtgaatggggtt
accatctccggtggaattcttgacggacaaggcactggtttgtgggattgtaaggcctcc
ggcaagggttgccccagcggagcaacgacactgggattttccaactcgaacaacattgtc
gtgagcggagtgacatccctaaacagccaaatgttccacatagtcatcaacggctgcaac
aatgtgaaattgcaaggtgttagggtttctgcctccagtaacagcccaaacacggatgga
atccacgtcggaaagtcctccggcgtcattattctcgactctaagatcgccaccggtgac
gattgtgtctcaattggtcctggaacaactaatctatggatcgaaaacgttgcatgcgga
cccggccatggaatcagcattgggagtctaggcaaggaccaggaggaggagggagtgcaa
aatgtaacggtcaaaactgttacatttacaggtactcaaaatggtctaagaattaaatca
tggggaagacttagtactggttttgctaagaacattctattccaacatgctttcatggtc
aatgtccgaaatccaatcgttattgatcaaaattattgccccggcgaaatagggtgtcct
ggtcaggattcgggagttcagattagcgatgtaacatatcaggacatccacgggacatca
gcaacagaagttgcggtgaaatttgactgcagttctaaattcccttgtagcaagatcact
cttgatgatgtgaagctcagttataagaacgaagcagcggaagcttcatgtagccatgcc
gggggaacagctttgggtactgttcagcctacaagttgtttgtag
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