Fragaria vesca (woodland strawberry): 101293239
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Entry
101293239 CDS
T02666
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101293239
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101293239
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
101293239
NCBI-ProteinID:
XP_004308003
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All DBs
Position
LG7:complement(21740969..21744786)
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AA seq
443 aa
AA seq
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MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGQVVNTKCNVGANRNQAFI
EFAELNQAITMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGE
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAQIATDAKNSLDGRNIPSYL
LPDNLGPCSLRITYSGHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGNGQISVGLDGKKQE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHVSYSRHTDLSIKVNNDRSRDYTLPTVPMVNSQPSILGQQPVHM
MNPAAPQYSGGAQFAPTGQAMMPQPSAGWVPTVPAVPSQPMPMQMPNQPYMPSGTVPSQM
GPGMMPGGAQHPNLPPYHNGHVQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgtccagtcagccacagttccgatacactcagccaccatccaaggtactc
catttgaggaacttgccgtgggagtgtacagaggaggaactgattgaactggggaagcca
tttggtcaagttgtgaacacaaagtgcaatgttggagcaaaccggaatcaagcttttatt
gaatttgcagagttgaatcaagctattacaatgatatcatattatgcctcatcatcagaa
ccggctcaagttagggggaaaactgtctacctacagtactccaataggcaagaaatagtg
aacaacaaaactgctgcagatgttgctggaaatgtactcttggtaacaattgaaggtgaa
gatgcacggcttgtcagtatagatgttttacacctggtattttcagcttttgggtttgtg
cataagataacaacttttgagaagacagcgggatttcaggcactggtccaattttcagat
gcacaaattgccacggatgcaaaaaattcactggatggaagaaacatccctagctatctg
ctccctgataatctgggaccttgtagtctcaggataacatattctggacacacagatttg
agtgtgaaatttcagagtcatcgaagcagggactacactaatccctaccttcctgttgct
ccatcagccattgatggaaatggtcagataagtgtgggtttggatggtaagaagcaagaa
cctgagagtaacgtgcttcttgcatccatcgagaacatgcagtatgctgttaccttggac
gttctgcacatggtcttctctgcttttgggcctgtccaaaagatcgccatgtttgataag
aacgggggagttcaggctttgattcagtatcctgatgttcagacagctgttgttgcaaag
gaagccttggaggggcattgcatttatgatggagggttttgcaagcttcacgtctcgtat
tcacgtcatactgatctcagcataaaggtaaacaatgataggagcagagactatacactt
cctaccgttccaatggtgaactcacaaccctcgattctaggacaacagccagttcacatg
atgaacccagctgctcctcaatacagtggtggtgcacaatttgctcctacaggtcaggct
atgatgcctcaaccttcagcagggtgggtacctacagttccagcagttccttctcagccc
atgccgatgcagatgcctaatcaaccttacatgccatctggaacagtaccctcccaaatg
ggtcctggcatgatgccgggtggcgcgcagcacccgaatttgcccccatatcacaatggt
catgtgcaatag
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