Fragaria vesca (woodland strawberry): 101293286
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Entry
101293286 CDS
T02666
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101293286
Enzymes [BR:
fve01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
101293286
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101293286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
TcdB_N
AIRS_C
Motif
Other DBs
NCBI-GeneID:
101293286
NCBI-ProteinID:
XP_004296720
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Position
LG4:complement(8112403..8117462)
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AA seq
665 aa
AA seq
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MGTSALNKRKGPKPQKASPNKKQKKEPFSAKNPKKPKKVEQVFEPSSDDEEEEIEELDEE
FDGGDEEGSGSDSDADIFGGDDPLQDDDDDNESLPGSDEDEDDDEKGSSESDSDSNAGDI
EKKSRRIDEKTRLEEEEGRKELELNIKDESDEFRLPTQKELEDEAHQPPDISNLQRRIKE
IVRVLSNFKALRPKEGASRKDYVEQLKRDLSSYYGYNEFLIGALVEMFPVVELVELIEAF
EKPRPMCLRTNTLKTRRRDLAASLINRGVNLDPLSKWSKVGLVVYESQVPVGATPEYMAG
YYMLQSASSFLPVMALAPQENERVVDMAAAPGGKTTYVAALMKNSGIIFANEMKEPRLKS
LTANLHRMGVTNTVVCNYDGRELPKVLGSNAVDRVLLDAPCSGTGVISKDESVKTSKSSD
EIQKCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALRKRNVKLVPC
GLDFGCPGFTRFREQRFHPSVEKTRRFYPHVHNMDGFFVAKLKKMSNLKPTTTESRLSET
VEAETVDVDLNMTEDDSEKNVRVDVQQHSTDEDTESEKKVFEGGKPVATGKKRKEKKLPS
FFSHLEGQFPLDQKAEQKVKSSDQKKEKRVKLKFPPREVIAKAREEKRTALRKNKAKNNK
VSTGE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggcacctctgcgctcaacaagagaaaggggccaaaaccccagaaggcttcccccaat
aagaagcaaaagaaggagcctttctctgccaaaaatccaaagaagcccaagaaagtcgag
caagtcttcgagccttcttctgatgatgaagaagaagagatagaggaacttgatgaagag
tttgatggaggagatgaggaaggatctggttctgatagtgacgctgacattttcggtggg
gatgatcccctccaagacgacgacgacgacaacgagtcccttccaggaagtgacgaagat
gaagatgatgatgagaaaggttcttcggagtcggattcagattccaacgccggtgatata
gagaagaaatcaaggcgcattgacgaaaaaacgagattggaagaggaagaaggtagaaag
gaactggaattgaatattaaggatgaatctgatgagttcagattaccaacgcagaaggaa
cttgaagatgaggcacatcaacctcctgatatttcaaacctccagaggaggataaaagag
attgttcgagtgctctcgaatttcaaggcattgaggccaaaagagggggcatcaaggaag
gattatgttgaacagcttaagagagatttaagctcatactatggctacaatgagtttctg
attggagctttagtagagatgtttccggttgttgaacttgtggagctcatagaagctttt
gaaaagcctcgacctatgtgtctccgaactaacactctaaagacacgaaggagggatttg
gcagctagtttgataaacagaggagtaaacctagatcccttaagcaagtggtcaaaagtt
ggactggttgtgtatgaatcacaagttccagttggtgccaccccagaatatatggctggt
tattacatgcttcaaagtgcaagctcctttttgcctgtaatggcccttgctcctcaagaa
aatgaacgagttgttgatatggcggctgctcctggtggtaaaacaacctatgttgcggct
ctaatgaaaaatagtggaattatatttgcaaatgaaatgaaggagccaaggcttaagtct
cttactgctaatttgcatcgtatgggggtgacaaacacagtcgtttgtaactatgatggc
agggagctccctaaggttcttggtagcaatgcggttgatagagttctgttagacgctcct
tgcagtgggacaggggttatatccaaagacgagtctgttaaaacctccaaaagttctgat
gaaatacagaaatgtgctcatctccagaagcaactgattctagctgcaattgacatggtg
gatgcgaattcaaaatcagggggatacattgtgtactccacgtgctccattatggttgct
gagaacgaagctgttattgactatgcactcaggaagagaaatgttaaacttgttccatgc
ggacttgattttgggtgtccagggtttacccggttcagggaacagcgcttccacccatca
gtggaaaagacgaggcggttctaccctcatgttcataatatggatggtttctttgtggca
aagctgaaaaagatgagcaatttgaagccaaccacaacagaatctcgactgtctgaaacg
gtagaggctgaaacagtagatgtggatctcaacatgacagaagatgacagtgaaaagaat
gtcagagttgatgttcagcagcactcaacagatgaggacacggaaagtgaaaagaaggtt
ttcgaaggtgggaaaccagtagccactgggaaaaagaggaaagaaaagaagctcccctcc
tttttctctcatctggaagggcaattcccattggatcaaaaagctgaacagaaggtgaaa
tcctcagaccagaaaaaggaaaagagagtgaaactgaaattcccccctagggaggtgatt
gcaaaagccagggaagagaagaggacagctctgaggaaaaacaaagctaagaacaataag
gtcagtacaggagaatga
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