Fragaria vesca (woodland strawberry): 101293290
Help
Entry
101293290 CDS
T02666
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101293290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101293290
03110 Chaperones and folding catalysts [BR:
fve03110
]
101293290
03029 Mitochondrial biogenesis [BR:
fve03029
]
101293290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101293290
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101293290
Messenger RNA biogenesis [BR:
fve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101293290
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP60 / Chaperonin
101293290
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101293290
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101293290
Exosomal proteins of other body fluids (saliva and urine)
101293290
Exosomal proteins of breast cancer cells
101293290
Exosomal proteins of colorectal cancer cells
101293290
Exosomal proteins of bladder cancer cells
101293290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7621
Motif
Other DBs
NCBI-GeneID:
101293290
NCBI-ProteinID:
XP_004297181
LinkDB
All DBs
Position
LG4:complement(16720116..16723982)
Genome browser
AA seq
616 aa
AA seq
DB search
MAFSPTPISALSSTNPTLPKRPSSPFTTANPKGIPKDLYFNHDGSATKKLLAGVSMVAEL
VGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDSVENVGVKLVRQAGAKTNDLAG
DGSTTAVILAHGLITEGVKVTAAGMNPIQIARGIEKTAVALVSELKLMSREIEDHELADV
AAVSAGNDYTVGNMIYSALCQVGKKGVVSIEKGKSTENTLQVVEGMQFDRGYLSPYFVTD
RQKMIVEFQECKLLLVDKIITHPEELFKILDNAVKEKYAIVIVAEGIEQEALTPVIRNKL
RGALKAVAIKAPAFGERKSHYLDDIAILTGATVVREEMGMILHKTGPEVLGTATKVVITK
DTTLIVTDGSTREAVNKRVSQIQRLVENTKEEFQKKILNERIGRLSGGIAILQVGAQTQV
ELKDKQLRIEDALNATKAAIEEGVVVGGGCCLLRLSKKVDVFKELMDNEEQKIGAEIFKK
ALSYPAKLIAKNAGVNGSVVVEKVLSNANMGYGYNAARDCYEDLMKAGIMDPSKVVRCCL
EHAASVAKTFLLSDAVVVEIKESNPIPRRMPRQRPKPPLPPMPQTPQMPPMSSMPSMPPM
SMPTSGARAFGSKYGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcattttctccaactcctatctctgcactatcttccaccaacccaacactgcccaaa
aggccttcttcacctttcaccactgcaaatccaaaaggcatccccaaagacctctacttt
aaccatgatggttcagccacaaagaagcttctggcaggggtgagcatggtggcagagctg
gttggggttacattgggtccaaagggaagaaatgtggtgctgcagaataagtatggacct
cccaagattgtcaatgatggtgaaactgttctcaaagagatcgaattggaggactctgtg
gagaatgtcggagttaaattggtgaggcaagctggtgcaaaaacaaatgatctggctgga
gatggttccactacagctgtaattcttgctcatggtttaattactgaaggtgtgaaggtt
actgcagctggcatgaatcccattcaaattgctcgtgggatcgagaagactgcagtggcc
ctggtatctgaactcaaattaatgtccagagagatcgaggatcacgaacttgcagatgtt
gctgcagttagtgcaggcaatgattatacagtggggaacatgatttacagtgctctttgt
caagtaggaaagaaaggtgtagtttctattgaaaaagggaagtctacagagaacactctt
caagttgtagaaggaatgcagtttgatcgcggatacttatcgccttactttgtcactgat
cgacaaaaaatgatagtggagtttcaagagtgtaagttgcttttggttgacaaaataatt
acacacccggaggagctgtttaagatattggacaatgcagtgaaagaaaagtatgcaata
gtgatagttgcagaggggattgaacaggaagctttaactccagtaataagaaacaagctc
agaggtgcactgaaggcagttgccattaaggcgcctgccttcggtgagcgcaaaagccac
tacttagacgacattgccattttgactggagcaacagtagtaagagaagagatgggaatg
atcttacataagactggcccggaggtattgggaactgctactaaggttgtgataactaag
gacactacactgatagttaccgatggaagcactcgagaagctgttaacaagagggtttct
cagatacaaaggcttgttgagaacactaaagaagaatttcaaaagaagatattaaatgaa
agaataggaagattatcaggggggattgctattctgcaggtaggggcacaaacacaagtt
gagttgaaggataaacaacttagaattgaagacgctttgaatgcaaccaaggcagcaatt
gaggaaggtgttgtagttggtggtggatgctgccttttgaggctctctaaaaaggtggat
gtcttcaaagaacttatggataatgaagaacagaagattggagcagaaatcttcaagaaa
gctctaagctatcctgcaaaactgatagctaaaaatgcaggtgtaaatggcagtgttgta
gtagagaaggttctatcaaatgctaatatggggtatggatataatgctgcaagagactgt
tatgaagacctaatgaaagctgggattatggatccatcaaaggtagttagatgttgcttg
gagcatgcagcatcagtcgcgaaaacttttctgttgtctgatgctgttgttgtcgagatt
aaggaatcaaatcccatcccaagaagaatgccgaggcaaaggccaaagccaccccttccc
cccatgccccaaacgccacaaatgccgccaatgtcatccatgccttcaatgccaccaatg
tccatgccaacctcaggtgctcgagcattcggttccaagtatggcagatga
DBGET
integrated database retrieval system
