Fragaria vesca (woodland strawberry): 101293299
Help
Entry
101293299 CDS
T02666
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101293299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101293299
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101293299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
101293299
NCBI-ProteinID:
XP_004299484
LinkDB
All DBs
Position
LG5:complement(9607976..9614820)
Genome browser
AA seq
777 aa
AA seq
DB search
MADDERDEVPMLSDTHPQSSNEHLALQIERFISRTRSASISIPMNSMDSYERDEVNLVGH
TGPLRTHTKTPFLAMSGPLYANQGRPDNVLRLPQGVTDQEAAETQTTAEKFPYTNTTNES
EWNDEYAAKNGHLLRSGQLGMCNDPYCTTCPTVYKATRPKHLRPSGIFDHKFQNAFYGDA
KGWARSFFSCLRPYIPGVMNPHTKIVQQWNQFFVISCLVAIFVDPLVFFLLSVQEDNKCI
VIDRPLTTTFVVFRSITDLIYFMHILLQFRLAYVAPDESRVVGAGVLVDHPKKIALNYLK
GYFLIDFFVVLPLPQIILLLVLPRNLGSSGANYAKNLLRAAVLLQYIPRLCRFLPLVAGQ
SPSGFIFESAWANFIINLLTFVLSGHVVGSGWYLFGLQRVNQCFRDACHNSTIVGCMSFI
DCGYGSNSEGPKGVEETLWKNNENATACLNGTGFDYGIYIKAVGLTTEDSVITRYVYALF
WGFQQISTLAGNLTPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLR
RRDVEQWMSHRRLPNELRRRVRQAERYNWAATRGVNEEMLLEVLPEDLQTDIRRHLFKFI
KKVRIFALMDEPILDSICQRLRQKTYIQGSKVLYRGGLIEKMVFIVRGQMESIGEDGIRV
SLCEGDVCGEELLTWCLEHSSVNKDGKKIRIPGQRMLSNRTVLCITNIEAFSLRAADIEE
VTSLFARFLRKPRVQGAIRYESPYWRGLAARCIQVAWRYRKKRLNRADTSQSNHAHS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgaaagagatgaggtacctatgctttcggatactcatccacaatcatca
aatgagcacttggcattacagattgagagatttatatccaggacccggagcgcatcaatt
tccattcctatgaactctatggactcatatgaaagggatgaagttaaccttgtaggccat
actggtcccttaaggactcacacaaaaacgccattcttagctatgagtggtccgttatat
gctaaccagggcaggcctgataatgttctgcggctacctcaaggtgtgacagatcaagaa
gcagcagaaactcaaactacagcagaaaagtttccttatactaatacaacaaacgagagt
gagtggaatgacgagtatgctgcaaaaaacggacatttactgagatctggtcaattgggg
atgtgcaatgatccttactgtacaacttgtccaactgtctataaggctactcgaccaaaa
cacttgaggccctctggtatatttgaccacaagttccagaatgctttctatggtgatgcc
aagggatgggcgaggagctttttctcatgtctgcgtccatatattcctggagttatgaat
cctcatactaaaattgtgcagcagtggaaccagttctttgtcatttcttgcttagttgca
atttttgtagatccattggttttcttcctgctgtctgttcaagaggataataaatgtata
gttattgatcggccattgaccactacttttgtggttttcagaagcataactgatctcata
tacttcatgcacatacttctccagtttagattggcttatgtggctcctgatgagtctaga
gtagttggtgctggagtgttagttgaccatccaaagaaaattgctctcaattaccttaaa
ggatatttcctgattgacttcttcgttgtattaccactaccacaaatcatattattgcta
gttctgccaagaaacttgggatcatctggagcaaactacgcaaaaaatcttttacgtgct
gccgttcttcttcagtatattcccagattgtgtaggtttctacctctggttgctgggcag
tctccaagtggcttcatatttgaatcagcatgggccaattttataataaatcttctcacg
tttgtcttgtctggccacgtcgtcgggtcaggctggtacctcttcggattacagagggtt
aatcaatgttttcgagatgcctgccacaactctacaattgttggatgcatgagcttcata
gactgtgggtatggaagtaacagtgaaggtcctaaaggggtcgaagaaacactctggaaa
aacaatgaaaatgctactgcttgtttgaatggaactggttttgactacggaatctacatc
aaagctgttggccttacaacagaagatagtgtaatcactcgatatgtatatgcgttgttt
tggggatttcagcaaatcagtactctggctggaaacctaactccaagctattttgtgtgg
gaagtcctcttcacaatggccattattggcctaggtctattgcttttcgctctgctcata
ggaaatatgcagaactttctgcaggctcttgggcggagaaggttagaaatgtcactgaga
cgtcgtgatgttgagcagtggatgagccatagacgtttgccgaatgaactaaggaggcga
gtacgccaagctgaaaggtacaattgggcagctaccagaggggtaaatgaagaaatgctt
ttggaagtcttgcctgaagaccttcagacagatataagaagacatctgttcaagtttatt
aagaaagtacggattttcgccctcatggatgaaccgatcttagattccatttgccaaaga
ctaagacaaaagacatacatccaaggaagcaaagttttgtaccgtggtggtctaattgag
aagatggtctttattgtgcgagggcaaatggagagcattggagaagatggcattagagtt
tctctatgtgaaggtgatgtttgtggtgaggaacttctcacatggtgtcttgagcattca
tcggtaaacaaagatggtaaaaagatcaggattcctggacagcgaatgctaagcaacagg
acagttctatgcataacgaacattgaagcattttcactaagagctgctgacattgaagaa
gtcaccagcctctttgctagattcttgcgcaaaccacgagttcaaggagccataaggtat
gagtcaccttactggagaggtcttgcggcaagatgcattcaagtggcttggagatacagg
aaaaagcgacttaatcgtgcagacacttctcaatccaatcatgctcatagttaa
DBGET
integrated database retrieval system
