KEGG   Fragaria vesca (woodland strawberry): 101293328
Entry
101293328         CDS       T02666                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101293328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101293328
   03041 Spliceosome [BR:fve03041]
    101293328
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101293328
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101293328
Spliceosome [BR:fve03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101293328
SSDB
Motif
Pfam: RRM_1 RRM_7 SPATS2-like
Other DBs
NCBI-GeneID: 101293328
NCBI-ProteinID: XP_004304845
LinkDB
Position
LG6:2514462..2517331
AA seq 434 aa
MAKLQTSKKRRLVKTADKTPKLEPQPPQSEQNNDEEEVDLRHKQPQTGSGSGSDSDSDSD
PSESLFQLLEPYSKEQLISLITSAASTDSSLRKRIRRAADADVSHRKIFVHGLGWDTTRE
VLVSAFEPFGEVEDSNLVMDKLTGKAKGYGFVLFKTRRAALKALREPKKTIGNRCASCQL
ASVGPGTNTNTAAPSGQSESYSGRKIYVSGVPHEADAEKLRALFVKFGEIETGPMGFDSQ
TGKCRGFALFLYKTVEGAKKALEEPVKVFEGHQLNCQKATEGSKNKNNAAAPAQQTQAPP
LAPVPGAQNMAFFGQYAGLNPLYGGMMTSMGGALVPGTGNPAMMARPLNPGLLAGALNTG
VFPAGQYGQVGAGGFGGVSNGMGSFGPGGSLLGAYGTIAPLPTMQSLQQVYPSSQPGQTA
TVRPQGTGGYQPYM
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcgaagctccaaacctccaagaagcgccgcctcgtcaaaaccgccgataagaccccg
aagctcgaaccacaaccaccacaatccgaacaaaacaatgacgaagaagaagtagacctc
cgccacaaacagccccaaaccgggtccggttccgggtcggactccgactccgactccgac
ccgtccgagtccctcttccagctcctggagccctactccaaggagcagctcatctccctc
ataacctccgccgcctccaccgactcctccctccgcaaacgcatccgccgcgccgccgac
gccgacgtctcccaccgcaagatcttcgtccacggcctcggctgggacaccacccgcgaa
gtcctcgtctccgccttcgagcctttcggcgaggtcgaggactccaatctcgtcatggac
aaactcaccggaaaagccaaaggctacggcttcgtcctcttcaagacccgccgcgccgcc
ctcaaagccctaagggagcccaagaagaccatcggcaaccgctgcgcctcctgccagctc
gcctccgtcggccccggcaccaacaccaacacggcggcgccgagcggccagtcggagtcc
tactccgggaggaagatttacgtcagcggcgtgccgcacgaggccgacgccgagaaattg
agagctctgtttgtgaaatttggggaaatcgagaccgggccaatggggttcgattcgcag
actggaaaatgccgagggtttgctttgttcttgtacaagactgttgagggtgccaagaag
gcgcttgaggagccggtgaaggttttcgaagggcatcaattgaactgccagaaggccact
gagggttctaagaacaagaacaatgcggctgcgccggcacagcaaacgcaggctccgccg
ctggcaccggtgcctggtgcgcagaatatggcatttttcggacagtatgcgggattgaat
ccgttgtatggtgggatgatgaccagtatgggaggtgcattggttcctgggactggtaac
ccggctatgatggcccggcctttgaatccgggtttacttgctggggcattgaatactggt
gtttttccagctggacagtatggtcaggttggtgctggggggttcggtggtgtgtctaat
ggtatggggagttttggcccgggaggttcgttgcttggggcatacgggactattgcaccg
cttcctacaatgcagagtctgcagcaagtttatccaagttcacagccggggcagacggct
acagttaggcctcaggggactggtgggtaccagccatatatgtga

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