Fragaria vesca (woodland strawberry): 101293339
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Entry
101293339 CDS
T02666
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fve01002
]
101293339
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101293339
Enzymes [BR:
fve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101293339
Peptidases and inhibitors [BR:
fve01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101293339
Ubiquitin system [BR:
fve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101293339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Cnd1_N
Motif
Other DBs
NCBI-GeneID:
101293339
NCBI-ProteinID:
XP_004288192
LinkDB
All DBs
Position
LG1:13394967..13399488
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AA seq
369 aa
AA seq
DB search
MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYSNSKN
IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL
LNELVDILEKEAQAAKSDQETSSPPEKLANGPKNGQANGSHKDPLVTWVHKNFQGILTNE
TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ
KRMKIKKPPHVLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDAESEYSLFAVV
VHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY
ESLGTSNKS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgccggctccaaactcgagaaggctctcggcgaccagttccccgaaggcgag
cgctatttcggcctcgagaatttcggcaacacttgctattgtaacagcgttttgcaggcg
ctttatttttgcgttccatttcgtgaacagttgttagaatactattccaacagtaagaat
attggggatgcagaagaaaatctcttgacgtgcttagccgatttgtttacgcagataagt
tcacaaaagaagaagacaggtgtaattgctccaaagcgtttcgtacagagattgaagaaa
caaaatgagctctttcgtagctacatgcatcaggatgctcatgaattcttaaactttttg
ctaaatgaacttgtcgacatactggagaaggaagcacaagctgcaaaaagtgatcaagaa
acttcttcacctcctgagaagctggcaaatggtccgaagaatggtcaagctaatggttct
cataaagatcccttagttacgtgggtgcacaaaaattttcagggaatacttaccaatgaa
acaaggtgcttacggtgtgagacagtgactgcaagagatgaaacattttttgacttgagc
cttgatattgaacagaacagttcaataacaagctgtttgaaaaacttcagttccacagag
acattgaatgctgaggacaaatttttttgcgacaagtgctgcagcttgcaagaagcgcag
aagaggatgaagataaagaaaccacctcacgttctggtcatacatctgaagcggttcaag
tacattgagcagcttggccgttacaagaagctatcttaccgggttgtatttcctcttgag
ctcaagttgagcaacacggttgaagatgcagagtctgagtattccctgtttgcagtagtt
gtccatgtcgggagtggtccaaaccatggacactatgttagccttgtgaaaagccataat
cactggttattttttgatgacgaaaatgtggagatgattgatgagtctgctgtgcaaact
ttctttgggtcagcacaagagtattcgagtaatacagatcacggatacatcctgttctat
gaaagcctcggcaccagtaacaagagttaa
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