Fragaria vesca (woodland strawberry): 101293425
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Entry
101293425 CDS
T02666
Name
(RefSeq) protein LHY-like
KO
K12133
MYB-related transcription factor LHY
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101293425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101293425
Transcription factors [BR:
fve03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
101293425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
101293425
NCBI-ProteinID:
XP_004306608
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Position
LG7:complement(2709830..2719541)
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AA seq
778 aa
AA seq
DB search
MDTFSAGEDLIIKARKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAVSKGVPVGQSIDIDIPPPRPKRKPSNPYPRKSSEAAPTWSTSHV
GAKDGNLVSSASSSHCKQAVDLEKGQLDERSSGGEKPSYGKENKDKNCSEVFTILSESHC
SSVSSEIKSSIHTQVALRTACTFREFVPPVKKVIPRDGNESYVTIELKGNEILKKTDTKK
IVQDNATSEASKLENTNALKLVQGEKADDLNCSLPTDGMQSTLTCPRNVPIQILDGSGGE
CNRTTTPALSLSFQDSVFHPMGKIHVQPNLFTNPAASTTTTTTTTEHDSNVSRSCIDQSI
PAIPPPFTPFHHNQEDYHSSLSSTFSSLIVSSLLQNPAAHAAASFAATFWPYTNLENKEG
SPACSAGSFPSSLMNSPPNMAAIAAATVAAATAWWAAHGMLPLCAPLQTSFSCPVPMTGV
ASMDNDQAHAAEAEKGQGTIQGPSLQDQQQEPEHSEAVQAQHSPSKSPTISSSDSENGGA
KPEIGSKADDNEKDIASTEVQDLNKAKSKKQVDRSSCGSNTTSCSEVETDVLEKQEKGEE
ELKQPDLNPASESSYRRTRSITNMSDSWKDKHMNDSWKEVSEEGRMAFQALFSREVLPQS
FSPPPDVKDKGNQDTIEGQQDSGEKDGRALMLDLNSKAWAPFCHPEVEKIASPPGGHNDA
EGLLTLGLGYGKLKSRRTGFKPYKRCSVEANENRVANAGSHCEEKGPKRLRLEGEAST
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacactttttcggctggagaagatttgatcattaaggcaagaaagccatatactatt
accaagcagcgggagcggtggactgaggaggagcataataggtttcttgaagccttgaag
ctctatgggcgagcatggcagcgcattgaagaacatataggtacaaagactgctgtgcag
atcagaagtcatgcgcagaaattcttttcaaagctggagaaggaggcagtcagtaaaggt
gttccggtaggacaatcaattgacatagatattccgcctccacgccctaaaaggaaacca
agcaatccttatcctcggaagtctagtgaagctgctcccacatggtccacatcgcatgtt
ggagcaaaggatggaaaccttgtgtcatcagcttcttcttcacattgtaaacaagcagtg
gacttggagaaaggacaacttgatgagagatccagtggaggagaaaagccaagttatgga
aaagaaaacaaagataaaaattgttcagaagtcttcaccatactctcagaatcgcactgc
tcctctgtgtcttctgaaatcaaaagttccatacacacacaggtggcactcagaactgct
tgcacttttagagagtttgtgcctccagtgaaaaaggtaatccctcgagatggcaatgaa
tcttatgtcactattgaacttaaaggaaatgagattttgaagaaaactgataccaaaaag
atagttcaagataatgccacaagtgaagcctcaaagttggagaacactaatgctttaaag
ttggttcaaggtgagaaagcagatgatttgaattgttcattgccaacagatgggatgcaa
agtactctgacctgcccgaggaatgttcctatacagatactggatgggagcggtggagaa
tgtaatcgaactacaaccccagctttgtcgttatcattccaggactctgtgtttcatcct
atgggaaagattcatgtacagcctaacctgtttacaaatccagctgcatctactactact
actactactactactgaacatgatagtaatgtatcaagatcttgtattgaccaatcaatt
ccagctattccgcctccattcaccccattccaccacaatcaagaggactaccactcatcc
ctttcctccacattttcaagtcttattgtctcttctctgctacagaaccctgcagcccat
gctgcggctagttttgcagccaccttctggccttacaccaatttagagaacaaggaaggt
tctcctgcatgctcagccggaagttttccatctagcctaatgaactcccctccaaatatg
gcagccattgctgcggccactgtagctgcagcaactgcctggtgggctgcccatggaatg
cttcccttgtgcgctcctcttcaaactagctttagctgtcctgtgcccatgactggagtt
gcatcaatggacaatgatcaagctcatgcagccgaggcagagaaaggacagggtactatt
caaggtccttcattgcaggatcaacagcaggagccagaacactcagaagctgtgcaagca
caacattcaccttcaaaatcaccaaccatatcctcatcagattctgaaaatggaggcgca
aagcctgaaattggatcaaaagctgatgacaatgagaaggacatagcatcaactgaagtt
caagacttgaacaaagcaaagagcaaaaaacaggtggaccgttcctcgtgtggttcaaac
acaacttcctgcagcgaagtagagacagatgtattagagaagcaagaaaaaggcgaggaa
gaactaaaacaacctgacttgaacccagcttctgagtccagttaccgccgcactagaagt
ataaccaacatgagtgattcttggaaagacaaacacatgaatgattcatggaaagaagtt
tctgaagaggggcgaatggcatttcaagcattattctcaagagaggtattgccccagagt
ttttcacctccacctgatgtgaaggataaggggaatcaggacactatagaaggacagcag
gatagtggtgagaaagatggaagagctctaatgttagacctgaacagcaaggcctgggca
ccattttgtcacccagaagtggagaaaattgcatcaccaccaggagggcacaacgatgca
gaggggctgttgacattaggcttgggatatggaaagctaaagtctcgtcgaacaggattc
aagccttacaaaaggtgctcggtagaggccaatgagaacagggtggcaaatgccggcagc
cactgtgaagagaaaggtcccaagaggcttcgcttggaaggggaagcttcaacttga
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