Fragaria vesca (woodland strawberry): 101293429
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Entry
101293429 CDS
T02666
Name
(RefSeq) DAZ-associated protein 1
KO
K14411
RNA-binding protein Musashi
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101293429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101293429
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101293429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
DUF5536
Motif
Other DBs
NCBI-GeneID:
101293429
NCBI-ProteinID:
XP_004288032
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All DBs
Position
LG1:10864331..10868214
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AA seq
364 aa
AA seq
DB search
MDRKLVVLGIPWDIDTEGLREYMCKYGELEDCIVMKERSTGRSRGFGYVTFASAEDAKSV
ASSEHFLGNRMLEVKVATPKEEMRTPARKVTRIFVARIPQSVTEANFRSHFGKYGEITDL
YMPKEQGSKMHRGIGFITFENADSVESLMVDTHELGGSNVVVDRATPKEDDFKPVARMPA
AQQGGYGAYNAYISAATRYAALGAPTLYDHPPHPGPAYGRGESARGLSRKIFVGRLPQEA
TSEDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFGEDGVADRVSRRSHEICGQQVAI
DTATPLDEAGTSGNFMMNNVEPYGGYGGPVRSYSRMYGSLDFDDWGYGMSSGRPSRADWR
YRPY
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaagcttgtggttttgggcattccatgggatattgatacggaagggttgaga
gagtatatgtgcaaatatggggaattggaggattgcattgtcatgaaggagcggtcaact
ggccgatctcgtggatttggatatgtgacgtttgcgtcagctgaagatgccaagagtgtt
gcatcgagtgaacactttctgggaaatagaatgctggaagttaaagtggctaccccaaag
gaagagatgagaacacctgcaagaaaagttaccaggatatttgttgcaaggatcccgcaa
tctgtgacagaagcaaactttcgaagtcattttgggaagtatggagagataacagatcta
tacatgccaaaggagcaaggctcaaaaatgcatcgaggaattgggttcataacgtttgaa
aatgcagactctgtcgaaagtttgatggttgatactcatgagttgggaggttccaatgta
gttgttgatcgagcaacacctaaggaggatgacttcaaaccagtggccagaatgccagca
gctcagcagggtggatatggtgcatataatgcgtatatctcagcagctactagatatgca
gcccttggtgctcccaccttgtatgatcatccacctcatccagggcctgcatatggaaga
ggagagtctgctcgaggattgagcagaaagatttttgttgggaggcttcctcaggaggca
acttctgaagatctccgccagtattttggtagatttggccgtatattggatgtttatgtt
cccagagatcccaaaagaactggccatagaggatttggttttgtaacctttggagaagat
ggtgtagcagatcgtgtatcacgaagatctcatgagatctgcggtcagcaggttgcaata
gacactgccacacctcttgatgaagctggtacaagtggaaactttatgatgaacaatgta
gaaccctatggtggatatggtggtcctgtgcgctcctatagcaggatgtatggaagtctg
gattttgatgattggggctatggaatgagcagtgggagaccatcaagagcagattggagg
tacaggccatactag
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