Fragaria vesca (woodland strawberry): 101293481
Help
Entry
101293481 CDS
T02666
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101293481
Enzymes [BR:
fve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
101293481
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101293481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
101293481
NCBI-ProteinID:
XP_004297513
LinkDB
All DBs
Position
LG4:complement(19967557..19970699)
Genome browser
AA seq
406 aa
AA seq
DB search
MPTTSFGSRALQICKNLNKRGTKMKRKIEETDMEIVWQSPANPPERKDYIFRNGRRHVRP
YYFEFIAHVKNRWAGKTIVDLFTDEFKGRNRDYYISAVKCGRIQVDGQLVPVSFIVKPSQ
KISHFLHRHEPPVMTWDVKILQTEPDVVTICKPASVPVHPCGQYRKNTVVGILQAEHGLA
PLFPIHRLDRLVSGLLILARSAAQADIFRQQIEGGMVHKQYIARVIGEFPEEEQVVDANI
DHNAREGRSSAEVGDSCSDAPTKGKTACTKFTRISSNGIQSIVLCEPVTGRTHQIRVHLQ
HAGHPIANDMLYLSKHVSDRSAEGMGADRAAANSDHSPASVVGKIKSTSHEDSSEDFSID
PMCTNCPSLAPKGYDYHEEALWLHCFRYSGPGWVYECPHPDWASLS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgacgtcgtttggctctagggctctgcaaatttgcaaaaacctgaataaaaga
ggaacaaaaatgaagaggaagatagaagagacggacatggagatcgtctggcagtcgccg
gcgaacccgccggagcggaaagattacatctttcgcaacgggaggcgccatgtgagaccc
tactactttgagttcattgctcatgttaagaataggtgggcggggaagaccatcgttgac
ttgttcactgacgagttcaaaggccggaatcgtgactactatattagtgcagtgaaatgt
gggaggatacaagttgatgggcagcttgtgccggtttcattcatagttaaaccgtcgcaa
aagataagccacttcctgcacaggcatgaaccgccagtgatgacttgggatgtgaaaatt
cttcaaacggaacctgatgtggtcaccatttgtaaacctgcatctgttccggtgcatcca
tgtggtcagtatcgtaagaacactgttgttggcatcctacaagcagagcatggcttggca
cctctatttccgattcatcggctagatcgtttggtctcaggactccttatcttggctaga
agcgcagcacaagctgacattttcaggcaacagattgagggaggaatggttcataaacag
tacattgcaagagtcattggagagtttcctgaagaggagcaagttgtagatgctaacata
gatcataatgctcgagaaggaaggagctctgccgaggttggtgattcgtgtagtgatgct
cccacgaaggggaagactgcttgtacaaagttcactagaatcagttcaaatggaattcag
agcattgtcttgtgtgaaccagtcactggccgcactcatcaaatacgcgtccatttgcaa
catgcaggccatccaatagcaaatgacatgctttacctgtccaaacatgttagtgatcgt
tcagctgaaggaatgggtgctgatagagctgctgctaattcagaccactctccggcttct
gttgttggcaaaattaaatccacttcgcatgaagattctagtgaggacttcagcattgat
ccaatgtgtacaaattgtccaagcttagctccaaaaggatacgattatcatgaagaggcc
ttgtggctacattgttttagatattctggacccggatgggtttatgaatgcccacatccg
gattgggcatcacttagctag
DBGET
integrated database retrieval system
