Fragaria vesca (woodland strawberry): 101293581
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Entry
101293581 CDS
T02666
Name
(RefSeq) uncharacterized LOC101293581
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101293581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101293581
Transcription factors [BR:
fve03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
101293581
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
101293581
NCBI-ProteinID:
XP_004297431
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Position
LG4:complement(19128097..19132344)
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AA seq
661 aa
AA seq
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MAALQSVVQSCMSTTTAASSFGGSCKGGGGVASASVMAVPDQFPAGLRVMVVDDDTTCLS
ILEKMLRRCLYQVTLCSQATDALNHLREKKGYFDVVLSDVHMPDMDGFKLLECIGLEMDL
PVIMMSADGRTSAVMKGIRHGACDYLIKPIREEELKNIWQHVARKKLSENKELELSGSLE
DNDRHKRGNSDVEYTSSVNEGTEGRARSQKKRSSAKEDEDGDNDNDDMSTSKKPRVVWSV
ELHQQFVSAVNQLGLDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSVEQQQSAN
AFCGPVEPNVKLVSHGNRFDIQALAASGQIPPQTLAALQAELLGQPVGNHGQAIDPPAML
HATLQRPRRAPIDHNVTFGQPLIKRQYFPQSIISAEDASSGGQWRSNSLGTVAPNSNLGG
FSTQNNMFVDILQPDQRPQQNRHQQPLLSEPIRSINVQPSCLVVPLQSSASFQAGNSPAS
VNQSSSFNRSTAVDYSLLSAQSNNNSLMNVGRISGHLKTPGILSGYSATTGSLSTPSCSV
IAESSTSPQNSTVTYSDARQMPGQLHNTSNIQDLYAPKSREMLDQGAYRNIGFVGKETRI
PSRFAGDEFDLQSNLNHGSIHVENSGNPVKLEPNMGFVDNANGAPIYQQFSSSDLTSVFN
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgcagagcgtggtgcagtcgtgcatgagcaccaccacggcggcgagcagc
ttcggcggctcgtgtaaaggcggaggcggtgttgcttcggctagtgtaatggcggttccc
gatcagtttccggcggggttgagagtcatggtggtcgacgacgacacgacttgcttgtcg
attctcgagaagatgcttcgccggtgtctctaccaggttacactttgctcccaggctacg
gatgctttgaatcatctacgagagaaaaagggctattttgatgtggtactgagtgatgtt
catatgcctgatatggatggatttaaactcctggaatgtatagggctggagatggatctt
cctgtcatcatgatgtctgctgatgggagaacaagtgctgttatgaaaggaatcagacat
ggggcttgcgattatctaattaagcctattcgtgaggaagagctcaagaatatctggcag
catgttgctaggaaaaaattaagtgaaaataaagagcttgaactatcagggagcttggaa
gataatgatcggcataaacggggaaatagcgatgtcgaatatacttcttctgtcaatgaa
ggaacagaaggaagagcgagaagtcagaagaaaaggagcagtgctaaagaagatgaagat
ggtgacaatgataatgatgatatgtctacatcaaagaaaccccgtgtagtatggtcagtt
gaactccatcagcaatttgtcagtgctgtgaaccaactggggcttgataaggctgtgcca
aagagaattcttgaattgatgaatgtacctggtttaagtagagaaaatgttgcaagccat
ctgcagaaattcaggttatatttgaagaggctaagtgtagagcaacaacaaagtgcaaat
gctttctgtggacctgttgaaccaaatgtgaaattggtttcgcatgggaatagatttgac
atccaagctttggctgcatctggacaaatacctcctcaaacgctagcagccctgcaagct
gagcttctcggtcaacctgtaggaaaccatgggcaagcaatagatccacctgctatgtta
catgcaaccttgcagaggccaaggcgtgcccctatagatcataatgtgacatttgggcag
cctttgataaaacgccaatactttccacaatccatcatatctgctgaggatgcatcttca
ggcggacaatggcggtctaatagtcttggtactgtggcaccgaacagcaatcttggaggg
tttagtactcagaataacatgtttgtggatatattgcagccggatcaacgaccacagcaa
aacagacatcagcagccgttgctatccgaacctattcgaagtatcaatgtacagccatct
tgccttgtggtgcccttgcagtcatcagctagtttccaggctggaaatagtcctgcttct
gtcaatcagagttctagctttaacaggtctactgctgttgattacagtctcctctctgct
caatctaataataattccttaatgaacgtcgggcggatatcaggacatcttaaaacccct
ggcattcttagtgggtactcagctactaccggttcgttatctactccatcgtgttctgta
attgctgaaagtagcaccagtccacaaaactcaactgtgacgtatagtgacgctcgacaa
atgcccgggcagttgcataatacgtcaaatatccaggatttgtatgctcctaaatcaagg
gaaatgcttgatcagggcgcttacaggaatatcggatttgttggtaaagagactcgcatt
ccaagtcgatttgcaggggacgagtttgatttgcaaagcaacttaaaccatggaagcatc
catgtcgagaacagtggtaacccagttaagctggagccaaatatgggttttgtggacaat
gcaaatggcgccccaatatatcaacagttttcttccagtgatctcacaagtgttttcaat
gaatag
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