Fragaria vesca (woodland strawberry): 101293720
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Entry
101293720 CDS
T02666
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101293720
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101293720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
WD40
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Aladin
B-prop_COPA_B_2nd
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
101293720
NCBI-ProteinID:
XP_004307148
LinkDB
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Position
LG7:11231426..11237314
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AA seq
538 aa
AA seq
DB search
MGVKGVHQGHGAIVLPIEQKLNDEMDIRKDKYLRGGEANLEALKDKKLKGQLAVREDLHL
RTAQAAAKAEKYLLPSEEGYLEPEGLEKTWRIKQDAIAPAVDVLSARNQYDIVVPDLGPY
RLDFTPSGRYMTVGGQKGHLAIVDMKQMSLIKEFQVRETVRDVVFLHDETMFAAAQKKYP
YIYNRDGTELHCLKEHGAALRLRYLEQHRLLASINEYGQLHYQDVTDGRMIGSYRTGFGR
TDVMQVNRHNALLSLGHSGGKVTMWSPTSSSAVIEMLCHRGPISAIAFHPTNRDLMATSG
KEKKVKLWDMRNLQGPLQTLSGQAETLDFSQKGLLARGTGSFLQVLRDSSGNQKYEKYMT
HPLVKGYQIEKVLFRPYEDVLCIGHSMGWSSILIPGSGNPNFDSWVANPFETRKQRRERE
VHSLLDKLPPETIMFDPTKIGTVKPPRKEKPTKEEKVAELEAAVEDAKDIVPKKKTKGRS
KPSKMKKKKQELIAGAKRPFLEQKMKEDEQAARKKQKALEQVELPTSLQRFARKKAAT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagggtgtgcatcaaggccatggtgccattgtgcttccaatagaacagaag
ctcaatgatgagatggatataaggaaggacaagtatcttagaggtggagaagctaatctt
gaggctttgaaagataaaaagttgaagggtcaactagctgttagagaagatttacatctc
agaactgcacaagctgcggctaaggctgagaagtaccttctgcctagtgaagaaggttat
ttggagcctgaaggcttagagaagacatggaggatcaaacaggacgcaatagcccctgca
gtagatgtcttaagtgcaaggaatcaatacgatattgttgtaccagatctcggtccgtac
aggctggatttcacgccaagtggtcgatacatgacggtcggtggacagaagggccatcta
gctattgtagacatgaagcaaatgagcctgatcaaagaatttcaggttagggagacagtt
cgcgatgtggtattcttgcatgatgagacgatgtttgctgcagcccagaaaaagtaccca
tatatttataatcgggatggaactgaacttcactgcttaaaggaacatggtgcagctcta
aggcttcgttatcttgaacaacacagactattggcatcaataaatgaatatggccagctt
cattatcaggatgtaacagatggtaggatgattggtagttacaggacaggctttggccgt
actgatgtgatgcaggtgaaccgccacaatgcacttctttcattgggtcattcaggtggt
aaagttaccatgtggagtcctacaagctcttctgctgttattgagatgctgtgccacagg
ggacccatctcagcaatagctttccaccctaccaatcgcgatctaatggccacatctggg
aaagagaaaaaagttaagctctgggacatgaggaatcttcaggggccactccagacgtta
tcaggtcaggcagagactctggatttcagtcaaaagggtctgctcgctcgtggaactgga
tcttttctacaggtcctgagagattcttctgggaatcagaagtacgagaaatatatgact
catccattagttaaaggttaccaaatagaaaaggtgttgtttcgaccgtatgaagatgtt
ttatgcatcgggcactccatggggtggtctagtattctgatacctggttctgggaacccc
aattttgattcgtgggtggcaaatccatttgaaacacgtaaacagagaagagagagggaa
gtgcactctctgcttgataagctcccacctgagacaattatgtttgatcccacaaagatt
ggcacagtgaaacctccaaggaaagagaaaccaacaaaggaggaaaaagtggctgagctg
gaagctgctgttgaagatgctaaggacattgtcccgaagaagaaaacaaaggggaggagt
aagccaagtaagatgaagaagaagaagcaggagctaattgccggtgccaagaggcctttc
ttggaacagaaaatgaaagaggatgaacaagcggctagaaagaagcagaaagcattggag
caagtggaactaccaacatcattgcagcggtttgctcgcaagaaagcagctacatga
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