Fragaria vesca (woodland strawberry): 101293837
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Entry
101293837 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101293837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101293837
03036 Chromosome and associated proteins [BR:
fve03036
]
101293837
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101293837
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101293837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101293837
NCBI-ProteinID:
XP_004309504
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Position
Un
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AA seq
1032 aa
AA seq
DB search
MFGASSSPFGQSSNSPFGSQSVFGQSSNTSNNPFSPQPFGSTNTFGAQTGSSLFGGTSTG
VFGQTQSSPFGASSSPAFGQQSSPFGAASTPAFGASSTQTSPFGGPSSTSVFGQKPAFGA
FGSSPAQTSLFGSTAQPSQPAFGSNMFGNTSSPFGGSQPAFGTNTTPAFGSTNTTAFGST
NTSAFGATTNPAFGGQATPAFGATSASPFGGTSTPAFGAPSTPTFGSTPSPAFGSTGSAF
GTTSPSLFGTGGAFGATPSTPSFGQSSPAFGTTTSAPAFGQSSTGFGFSSSTPAFGQSSS
TFGSTQFGASSPFGGQSSSFGVQSTTPTLGNNAFGQSTFGAQRGGSRATPYTGTSEPDSN
GLGKLESISAMPAYKEKSHEELRWEDYQLGDKGGPSPAAGGGFGTSTVQTNPLNPNPATP
FGQTSSNPFNNSTSSSLFAPKTSSFPSAGFGVTSSSPFSSSSPFSSSSPFSSSSPFSSST
QGNLFTPASSAPAFGQTAPAFGSSPSFGQTSSPSPFSSPSSFSFSTAATSSTPSFNFPTP
SNPQTQFGQTGTAAFGQNSSPFSSNLFSNTSSLQSSSLGTTTNQLGNTQPAPAFPNFQTS
QPSQSSPFGFNNTSTFGQQQPGNTGFGGLAGISGQSNFGQLSVAQGYAGVQQPVPATNPF
GTLPAMPQMSIGRGGTAPSIQYGISSMPVVDKPAPVRVTSILTPRHLSQRRIRLPARKYN
PKNDNPKAFFSDDEETPTTPKGDVVFHPRENPRALVIRPREQQWPLRASAEKTTALKNTT
TPIHENGESSGAPLFVGSNSEDKDETLQENGAVKDHLNHVKANQKPNGVHDDRALEKGDS
YTTLSGHRAGEAAIVYEHGADIEAQMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDF
VVGRHGYGSIKFLGETDVRRLDLEALVQFNNKEVIVYRDENKKPPVGQGLNKPAVVTLLN
IKCIEKKTGTQYTEGPKVEKYKEMLKKKAEEQGAKFVSYDPKKEEWTFMVDHFSEYNLKD
EDDWDVDAAPDC
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcttccagcccttttgggcagtcatctaacagcccgtttgggtcccaa
tcggtgtttgggcaaagcagcaacacaagtaacaatcctttttctccccagccctttggt
agcaccaacacatttggtgcccaaacagggagttctttatttggtggaacttcaactggc
gtatttggtcaaacccaatcctcgccttttggtgcttcatcttcgccagcttttggacag
cagagttctccatttggagcagcttctactccagcattcggtgcgtcgtctactcaaaca
agtccatttggtggaccatccagtacgtctgtttttggtcagaagcctgcttttggagca
tttgggtcgagtcctgctcaaacaagtctatttgggagcacagctcaaccatcacaacca
gcattcggaagcaatatgtttggtaacacctcttcaccatttggtggaagtcagcctgca
tttggaactaatactaccccagcctttggttcaacaaacaccacggcctttggttcaaca
aatacctcagcctttggtgccaccaccaaccctgcttttggtggccaagccactccagcc
tttggggccacaagcgcttcgccttttggtggtacaagtactccggcctttggtgcacca
agtactcccacctttggctcaacaccaagtcctgcatttggaagcacaggatctgcattt
gggacaacaagtcccagcttgtttggaactgggggagcatttggggcaactccaagcacc
ccgtcttttggtcaatctagcccagcttttggtactacaacaagtgctcctgcttttggc
caatcaagcacaggttttggcttttcatcaagtactcctgcatttggccaatcaagttca
acctttggtagcacccaatttggtgcttcatctccttttggagggcagagttcttcattt
ggggttcagtcaacaacaccaacacttggaaacaatgcctttggacagtcaacttttggg
gcccaacggggtggaagtagagcgactccttacacaggcacatctgaaccagatagtaat
ggactggggaaattggagtcaatttcagcaatgccagcctataaagaaaaaagtcacgag
gaattgagatgggaggattaccaattaggggataaaggtggaccgtctcctgctgccggg
ggtggctttggcacgtcaactgtacagacaaatcctttgaatcctaatcctgcaacacca
tttggtcaaacatcttcaaatcctttcaataattcaacctcatctagtttatttgctcca
aaaacctcatccttcccttctgctggttttggtgtcacttcatcttcaccatttagttcg
tcttcaccgtttagttcgtcgtcaccatttagttcttcttcgccgtttagttcatcaact
caaggcaatttgtttacacctgcatcatcagccccagcatttggccaaacagctccagca
tttggctcttccccatcatttggccaaacatcgtctccgtcaccttttagttcaccgtca
tccttctcattctctactgcggccacatcatccactccctcattcaatttccccactcct
tcaaacccgcagacacaatttggtcaaacaggcactgccgcatttgggcagaattcatct
ccctttagttcaaacttgttcagtaatacgtccagcttgcagagcagttcattggggact
acaactaaccaacttggtaatactcaaccagctcctgcttttcctaatttccagacatct
cagccttctcagagtagtccttttggcttcaacaacaccagcacttttggtcaacaacag
ccaggcaatacaggctttggtggtttagcaggcatttctggtcagagcaactttggacaa
ttgtctgtggctcaaggctatgcaggtgtacaacaaccagtacctgctacaaatccattt
ggaacactccccgcgatgcctcagatgtcaattggtcgtgggggaactgcaccctcgatt
caatatggaatttcaagcatgcctgttgtggataaacctgctcctgttagggtgacatcc
atcttgactcctcgacacctgtcacaacgccggatcagattacctgcaagaaaatataat
cctaaaaatgataacccaaaggctttttttagtgatgatgaagaaacgcccacaacaccc
aagggtgatgttgttttccatcccagggaaaacccaagagcgcttgtcattcgtccacga
gaacaacagtggcctctaagagcgagtgctgagaaaacaacagcactgaagaatacaact
actccaatccatgagaacggagagagttcgggagcaccactctttgtgggatccaactct
gaggataaagacgaaactctgcaagaaaatggtgctgtgaaggatcatttaaatcatgtc
aaagctaatcagaaacctaatggagtacatgatgatcgcgcccttgagaaaggggactcg
tatacaacactaagtgggcacagagctggtgaggctgctattgtatatgagcatggtgct
gacattgaggcacaaatgccgaagctccgacgctctgattactacacagagccaagaatc
caagaactcgcggcaaaggaaagggcagagccagggttctgccgtcgtgtgaaggacttt
gtggttgggcgacatggttatggtagcataaagttcttgggggagacagatgtaaggcgc
cttgatcttgaggctctggtgcagttcaacaataaggaggtaattgtgtaccgtgatgag
aacaagaaacctcctgttgggcaaggccttaataaacctgctgtggttacacttctcaac
attaaatgcattgagaagaagactggcactcagtatacagaaggaccaaaagttgagaaa
tacaaggagatgctgaagaagaaggctgaggaacaaggtgccaagtttgtctcctacgac
cctaagaaggaagagtggacgttcatggtcgaccacttcagtgagtacaatctgaaagac
gaagacgactgggatgtggatgctgccccagattgctga
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