KEGG   Fragaria vesca (woodland strawberry): 101293924
Entry
101293924         CDS       T02666                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03013  Nucleocytoplasmic transport
fve03015  mRNA surveillance pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101293924
  09122 Translation
   03013 Nucleocytoplasmic transport
    101293924
   03015 mRNA surveillance pathway
    101293924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101293924
   03041 Spliceosome [BR:fve03041]
    101293924
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101293924
    TREX complex
     101293924
Spliceosome [BR:fve03041]
 Complex C
  Other components
   EJC/TREX
    101293924
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101293924
SSDB
Motif
Pfam: RRM_1 FoP_duplication EBNA2_Core RRM_11 SspM YHR127W_C
Other DBs
NCBI-GeneID: 101293924
NCBI-ProteinID: XP_004288352
LinkDB
Position
LG1:complement(16812008..16818179)
AA seq 283 aa
MTTTLDMSLDDMIKSKRGGNRYRTRERGGGRGPRGGRGGRGSFIGGRMVRRGPPPAAINA
RPSAHTIAKSFRRTKHFPWQPDLFEESLRAAGISGIEIGTKLYVSNLHYGVTNEDIRELF
SEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGVNEG
MPISARVNVTGVQGRKKRTVVMTPRPAHAGGYALPAVNRGPGPSRSTHGGIRNGRGISRG
RGRGRGRGRGRGQGSEWKKKPVDKSVDELDKELDTYHAEAMQT
NT seq 852 nt   +upstreamnt  +downstreamnt
atgactactactttggatatgtcacttgatgatatgattaagagcaaaaggggtggtaat
cgttatagaaccagagaacgcggcggcggaaggggtcctcgcggcggtcggggtggccgt
gggtcttttattggtggaagaatggttcggagaggtcctcccccggcagcaataaatgct
cgaccatctgcccacaccattgccaagtccttccgcagaaccaagcattttccgtggcag
ccagatttgtttgaagagagcctcagagctgccgggatttcagggattgaaattggcaca
aaattatatgtgtccaacttgcactatggagtgacaaatgaggatataagggaactcttc
tctgagatcggagagctgaagcgatatgcagttcattttgataaaaatggacgaccaagt
ggctcagctgaagtggtttataccagaagaagtgacgcatttgcagcattgaaacggtat
aataatgtcctattggatgggaagcctatgaaaatcgagattgttggtgtcaatgaggga
atgccaatttctgctcgtgttaatgtgacaggagtacaaggaagaaagaagaggacagtt
gtaatgacgcccagacctgctcatgctggtggctatgctttgcctgcagtaaatcgtggt
cctggcccttctaggagcactcatggagggatcaggaatggccgtggaatttcacgtggg
cgtgggcgtgggcgtgggcgtgggcgtggacgtggacaaggatctgagtggaagaagaaa
cctgttgacaagtcagttgatgaacttgacaaggaactggatacctatcatgcagaagcc
atgcaaacttag

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