Fragaria vesca (woodland strawberry): 101293924
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Entry
101293924 CDS
T02666
Name
(RefSeq) THO complex subunit 4D
KO
K12881
THO complex subunit 4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
fve03015
mRNA surveillance pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101293924
09122 Translation
03013 Nucleocytoplasmic transport
101293924
03015 mRNA surveillance pathway
101293924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101293924
03041 Spliceosome [BR:
fve03041
]
101293924
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101293924
TREX complex
101293924
Spliceosome [BR:
fve03041
]
Complex C
Other components
EJC/TREX
101293924
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101293924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
EBNA2_Core
RRM_11
SspM
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
101293924
NCBI-ProteinID:
XP_004288352
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All DBs
Position
LG1:complement(16812008..16818179)
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AA seq
283 aa
AA seq
DB search
MTTTLDMSLDDMIKSKRGGNRYRTRERGGGRGPRGGRGGRGSFIGGRMVRRGPPPAAINA
RPSAHTIAKSFRRTKHFPWQPDLFEESLRAAGISGIEIGTKLYVSNLHYGVTNEDIRELF
SEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGVNEG
MPISARVNVTGVQGRKKRTVVMTPRPAHAGGYALPAVNRGPGPSRSTHGGIRNGRGISRG
RGRGRGRGRGRGQGSEWKKKPVDKSVDELDKELDTYHAEAMQT
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgactactactttggatatgtcacttgatgatatgattaagagcaaaaggggtggtaat
cgttatagaaccagagaacgcggcggcggaaggggtcctcgcggcggtcggggtggccgt
gggtcttttattggtggaagaatggttcggagaggtcctcccccggcagcaataaatgct
cgaccatctgcccacaccattgccaagtccttccgcagaaccaagcattttccgtggcag
ccagatttgtttgaagagagcctcagagctgccgggatttcagggattgaaattggcaca
aaattatatgtgtccaacttgcactatggagtgacaaatgaggatataagggaactcttc
tctgagatcggagagctgaagcgatatgcagttcattttgataaaaatggacgaccaagt
ggctcagctgaagtggtttataccagaagaagtgacgcatttgcagcattgaaacggtat
aataatgtcctattggatgggaagcctatgaaaatcgagattgttggtgtcaatgaggga
atgccaatttctgctcgtgttaatgtgacaggagtacaaggaagaaagaagaggacagtt
gtaatgacgcccagacctgctcatgctggtggctatgctttgcctgcagtaaatcgtggt
cctggcccttctaggagcactcatggagggatcaggaatggccgtggaatttcacgtggg
cgtgggcgtgggcgtgggcgtgggcgtggacgtggacaaggatctgagtggaagaagaaa
cctgttgacaagtcagttgatgaacttgacaaggaactggatacctatcatgcagaagcc
atgcaaacttag
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integrated database retrieval system